Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC008175.2-201ENST00000612840 297 ntBASIC19.81■□□□□ 0.76
RAE1P78406 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.81■□□□□ 0.76
RAE1P78406 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.81■□□□□ 0.76
RAE1P78406 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.81■□□□□ 0.76
RAE1P78406 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAE1P78406 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAE1P78406 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAE1P78406 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RAE1P78406 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAE1P78406 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAE1P78406 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAE1P78406 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.8■□□□□ 0.76
RAE1P78406 AC010141.2-201ENST00000452426 721 ntBASIC19.8■□□□□ 0.76
RAE1P78406 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.8■□□□□ 0.76
RAE1P78406 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAE1P78406 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RAE1P78406 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAE1P78406 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RAE1P78406 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAE1P78406 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.79■□□□□ 0.76
RAE1P78406 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.79■□□□□ 0.76
RAE1P78406 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.79■□□□□ 0.76
RAE1P78406 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RAE1P78406 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RAE1P78406 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
RAE1P78406 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAE1P78406 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.78■□□□□ 0.76
RAE1P78406 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RAE1P78406 KRT18P14-201ENST00000534205 1250 ntBASIC19.78■□□□□ 0.76
RAE1P78406 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.78■□□□□ 0.76
RAE1P78406 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.78■□□□□ 0.76
RAE1P78406 RARRES2P11-201ENST00000635158 484 ntBASIC19.78■□□□□ 0.76
RAE1P78406 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.78■□□□□ 0.76
RAE1P78406 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RAE1P78406 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAE1P78406 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RAE1P78406 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAE1P78406 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.77■□□□□ 0.76
RAE1P78406 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAE1P78406 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAE1P78406 LINC01006-201ENST00000333319 2292 ntBASIC19.77■□□□□ 0.76
RAE1P78406 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.77■□□□□ 0.76
RAE1P78406 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAE1P78406 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAE1P78406 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAE1P78406 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAE1P78406 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RAE1P78406 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.77■□□□□ 0.76
RAE1P78406 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAE1P78406 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.77■□□□□ 0.76
RAE1P78406 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RAE1P78406 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RAE1P78406 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.76■□□□□ 0.75
RAE1P78406 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.76■□□□□ 0.75
RAE1P78406 SLC7A5P2-201ENST00000553010 536 ntBASIC19.76■□□□□ 0.75
RAE1P78406 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.76■□□□□ 0.75
RAE1P78406 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.76■□□□□ 0.75
RAE1P78406 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.76■□□□□ 0.75
RAE1P78406 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 LINC01521-201ENST00000504184 1943 ntBASIC19.76■□□□□ 0.75
RAE1P78406 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
RAE1P78406 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 KRT16P2-201ENST00000414673 1423 ntBASIC19.76■□□□□ 0.75
RAE1P78406 AC004854.2-201ENST00000608450 1441 ntBASIC19.76■□□□□ 0.75
RAE1P78406 AC073130.3-201ENST00000624389 2278 ntBASIC19.76■□□□□ 0.75
RAE1P78406 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAE1P78406 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAE1P78406 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms