Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEP78395 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.95■□□□□ 0.94
PRAMEP78395 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEP78395 AC008175.2-201ENST00000612840 297 ntBASIC20.95■□□□□ 0.94
PRAMEP78395 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEP78395 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEP78395 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEP78395 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEP78395 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PRAMEP78395 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEP78395 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRAMEP78395 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEP78395 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PRAMEP78395 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEP78395 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PRAMEP78395 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEP78395 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEP78395 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEP78395 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.94■□□□□ 0.94
PRAMEP78395 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEP78395 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEP78395 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEP78395 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEP78395 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.94■□□□□ 0.94
PRAMEP78395 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEP78395 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEP78395 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEP78395 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.94■□□□□ 0.94
PRAMEP78395 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEP78395 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PRAMEP78395 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRAMEP78395 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEP78395 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEP78395 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEP78395 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEP78395 TERF1P2-201ENST00000583350 1212 ntBASIC20.93■□□□□ 0.94
PRAMEP78395 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEP78395 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PRAMEP78395 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.93■□□□□ 0.94
PRAMEP78395 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEP78395 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
PRAMEP78395 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEP78395 AC061975.6-201ENST00000579045 1553 ntBASIC20.93■□□□□ 0.94
PRAMEP78395 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEP78395 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEP78395 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PRAMEP78395 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PRAMEP78395 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEP78395 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PRAMEP78395 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEP78395 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEP78395 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PRAMEP78395 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEP78395 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEP78395 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.92■□□□□ 0.94
PRAMEP78395 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEP78395 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEP78395 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.92■□□□□ 0.94
PRAMEP78395 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.92■□□□□ 0.94
PRAMEP78395 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.92■□□□□ 0.94
PRAMEP78395 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PRAMEP78395 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEP78395 AP004607.4-201ENST00000530158 1459 ntBASIC20.92■□□□□ 0.94
PRAMEP78395 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEP78395 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEP78395 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEP78395 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
PRAMEP78395 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRAMEP78395 POU5F1P4-201ENST00000413175 1085 ntBASIC20.91■□□□□ 0.94
PRAMEP78395 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.91■□□□□ 0.94
PRAMEP78395 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.91■□□□□ 0.94
PRAMEP78395 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.91■□□□□ 0.94
PRAMEP78395 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.91■□□□□ 0.94
PRAMEP78395 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.91■□□□□ 0.94
PRAMEP78395 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.91■□□□□ 0.94
PRAMEP78395 AC138907.5-202ENST00000569484 235 ntBASIC20.91■□□□□ 0.94
PRAMEP78395 CCDC92B-201ENST00000575506 885 ntBASIC20.91■□□□□ 0.94
PRAMEP78395 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.91■□□□□ 0.94
PRAMEP78395 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PRAMEP78395 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.91■□□□□ 0.94
PRAMEP78395 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PRAMEP78395 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PRAMEP78395 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PRAMEP78395 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PRAMEP78395 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PRAMEP78395 KRT18P14-201ENST00000534205 1250 ntBASIC20.9■□□□□ 0.94
PRAMEP78395 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PRAMEP78395 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.9■□□□□ 0.94
PRAMEP78395 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRAMEP78395 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.89■□□□□ 0.94
PRAMEP78395 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEP78395 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms