Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM6P62312 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM6P62312 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM6P62312 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.29■□□□□ 0.52
LSM6P62312 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSM6P62312 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM6P62312 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.29■□□□□ 0.52
LSM6P62312 KRT18P20-201ENST00000548986 1279 ntBASIC18.29■□□□□ 0.52
LSM6P62312 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.29■□□□□ 0.52
LSM6P62312 AC104187.1-201ENST00000607510 612 ntBASIC18.29■□□□□ 0.52
LSM6P62312 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM6P62312 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM6P62312 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSM6P62312 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LSM6P62312 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 AC006128.1-201ENST00000624704 1661 ntBASIC18.28■□□□□ 0.52
LSM6P62312 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LSM6P62312 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.28■□□□□ 0.52
LSM6P62312 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LSM6P62312 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LSM6P62312 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
LSM6P62312 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 AP001160.3-201ENST00000601484 763 ntBASIC18.28■□□□□ 0.52
LSM6P62312 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.28■□□□□ 0.52
LSM6P62312 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.28■□□□□ 0.52
LSM6P62312 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.28■□□□□ 0.52
LSM6P62312 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM6P62312 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.27■□□□□ 0.52
LSM6P62312 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LSM6P62312 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.27■□□□□ 0.52
LSM6P62312 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.27■□□□□ 0.52
LSM6P62312 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.27■□□□□ 0.52
LSM6P62312 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.27■□□□□ 0.52
LSM6P62312 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM6P62312 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
LSM6P62312 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.27■□□□□ 0.51
LSM6P62312 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LSM6P62312 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LSM6P62312 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LSM6P62312 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.26■□□□□ 0.51
LSM6P62312 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.26■□□□□ 0.51
LSM6P62312 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.26■□□□□ 0.51
LSM6P62312 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.26■□□□□ 0.51
LSM6P62312 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
LSM6P62312 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.26■□□□□ 0.51
LSM6P62312 PLK5-205ENST00000642079 1969 ntBASIC18.26■□□□□ 0.51
LSM6P62312 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM6P62312 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.25■□□□□ 0.51
LSM6P62312 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSM6P62312 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.25■□□□□ 0.51
LSM6P62312 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSM6P62312 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM6P62312 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM6P62312 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM6P62312 AC245052.3-201ENST00000450182 901 ntBASIC18.25■□□□□ 0.51
LSM6P62312 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM6P62312 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM6P62312 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM6P62312 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
LSM6P62312 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LSM6P62312 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM6P62312 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM6P62312 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LSM6P62312 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM6P62312 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM6P62312 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.24■□□□□ 0.51
LSM6P62312 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM6P62312 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.24■□□□□ 0.51
LSM6P62312 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.24■□□□□ 0.51
LSM6P62312 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms