Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
VSX2P58304 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VSX2P58304 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.96■□□□□ 0.79
VSX2P58304 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VSX2P58304 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VSX2P58304 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VSX2P58304 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.96■□□□□ 0.79
VSX2P58304 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VSX2P58304 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.96■□□□□ 0.79
VSX2P58304 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.96■□□□□ 0.79
VSX2P58304 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VSX2P58304 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 AC244015.2-201ENST00000616358 1861 ntBASIC19.96■□□□□ 0.79
VSX2P58304 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VSX2P58304 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VSX2P58304 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VSX2P58304 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
VSX2P58304 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.95■□□□□ 0.78
VSX2P58304 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VSX2P58304 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VSX2P58304 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.95■□□□□ 0.78
VSX2P58304 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VSX2P58304 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VSX2P58304 MIR663A-201ENST00000385250 93 ntBASIC19.95■□□□□ 0.78
VSX2P58304 CROCCP5-201ENST00000436658 830 ntBASIC19.95■□□□□ 0.78
VSX2P58304 CNN2P6-201ENST00000439038 900 ntBASIC19.95■□□□□ 0.78
VSX2P58304 AC006970.2-201ENST00000450065 779 ntBASIC19.95■□□□□ 0.78
VSX2P58304 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
VSX2P58304 AC013268.1-206ENST00000638368 961 ntBASIC19.95■□□□□ 0.78
VSX2P58304 AC112229.1-201ENST00000639295 961 ntBASIC19.95■□□□□ 0.78
VSX2P58304 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VSX2P58304 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VSX2P58304 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.95■□□□□ 0.78
VSX2P58304 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VSX2P58304 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
VSX2P58304 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VSX2P58304 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VSX2P58304 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VSX2P58304 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VSX2P58304 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VSX2P58304 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VSX2P58304 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.94■□□□□ 0.78
VSX2P58304 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.94■□□□□ 0.78
VSX2P58304 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.94■□□□□ 0.78
VSX2P58304 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
VSX2P58304 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VSX2P58304 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.94■□□□□ 0.78
VSX2P58304 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VSX2P58304 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VSX2P58304 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.93■□□□□ 0.78
VSX2P58304 RBM17P2-201ENST00000616397 1405 ntBASIC19.93■□□□□ 0.78
VSX2P58304 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
VSX2P58304 LINC00565-201ENST00000562710 2331 ntBASIC19.93■□□□□ 0.78
VSX2P58304 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.93■□□□□ 0.78
VSX2P58304 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 AC005181.1-201ENST00000604782 1256 ntBASIC19.93■□□□□ 0.78
VSX2P58304 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
VSX2P58304 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.93■□□□□ 0.78
VSX2P58304 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.93■□□□□ 0.78
VSX2P58304 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VSX2P58304 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VSX2P58304 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.92■□□□□ 0.78
VSX2P58304 AC245052.3-201ENST00000450182 901 ntBASIC19.92■□□□□ 0.78
VSX2P58304 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.92■□□□□ 0.78
VSX2P58304 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.92■□□□□ 0.78
VSX2P58304 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.92■□□□□ 0.78
VSX2P58304 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VSX2P58304 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VSX2P58304 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VSX2P58304 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VSX2P58304 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms