Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH4P55283 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.38■■□□□ 1.01
CDH4P55283 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.38■■□□□ 1.01
CDH4P55283 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.38■■□□□ 1.01
CDH4P55283 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDH4P55283 AL591742.1-201ENST00000604433 565 ntBASIC21.38■■□□□ 1.01
CDH4P55283 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.38■■□□□ 1.01
CDH4P55283 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CDH4P55283 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.38■■□□□ 1.01
CDH4P55283 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDH4P55283 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CDH4P55283 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CDH4P55283 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.37■■□□□ 1.01
CDH4P55283 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CDH4P55283 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.37■■□□□ 1.01
CDH4P55283 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.37■■□□□ 1.01
CDH4P55283 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.37■■□□□ 1.01
CDH4P55283 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 AL162412.1-201ENST00000567129 965 ntBASIC21.37■■□□□ 1.01
CDH4P55283 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.37■■□□□ 1.01
CDH4P55283 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.37■■□□□ 1.01
CDH4P55283 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDH4P55283 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDH4P55283 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.36■■□□□ 1.01
CDH4P55283 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDH4P55283 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDH4P55283 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.36■■□□□ 1.01
CDH4P55283 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.36■■□□□ 1.01
CDH4P55283 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDH4P55283 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDH4P55283 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.35■■□□□ 1.01
CDH4P55283 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.35■■□□□ 1.01
CDH4P55283 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.35■■□□□ 1.01
CDH4P55283 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.35■■□□□ 1.01
CDH4P55283 AL050303.2-201ENST00000619798 666 ntBASIC21.35■■□□□ 1.01
CDH4P55283 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.35■■□□□ 1.01
CDH4P55283 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.35■■□□□ 1.01
CDH4P55283 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.35■■□□□ 1.01
CDH4P55283 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDH4P55283 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.35■■□□□ 1.01
CDH4P55283 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH4P55283 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CDH4P55283 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CDH4P55283 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CDH4P55283 CYP2T1P-201ENST00000432607 1285 ntBASIC21.34■■□□□ 1.01
CDH4P55283 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CDH4P55283 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.34■■□□□ 1.01
CDH4P55283 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH4P55283 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.33■■□□□ 1.01
CDH4P55283 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH4P55283 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.33■■□□□ 1.01
CDH4P55283 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDH4P55283 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDH4P55283 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.33■■□□□ 1.01
CDH4P55283 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.33■■□□□ 1.01
CDH4P55283 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.33■■□□□ 1.01
CDH4P55283 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.33■■□□□ 1.01
CDH4P55283 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.33■■□□□ 1.01
CDH4P55283 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.33■■□□□ 1.01
CDH4P55283 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CDH4P55283 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.33■■□□□ 1
CDH4P55283 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDH4P55283 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CDH4P55283 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.32■■□□□ 1
CDH4P55283 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH4P55283 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDH4P55283 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDH4P55283 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH4P55283 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
CDH4P55283 NCF1B-203ENST00000435988 1254 ntBASIC21.32■■□□□ 1
CDH4P55283 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.32■■□□□ 1
CDH4P55283 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms