Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H2P55055 AL136967.2-201ENST00000623968 743 ntBASIC19.65■□□□□ 0.74
NR1H2P55055 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NR1H2P55055 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NR1H2P55055 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.65■□□□□ 0.74
NR1H2P55055 BX323043.1-201ENST00000641006 1765 ntBASIC19.65■□□□□ 0.74
NR1H2P55055 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H2P55055 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H2P55055 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
NR1H2P55055 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NR1H2P55055 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.64■□□□□ 0.73
NR1H2P55055 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H2P55055 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H2P55055 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.64■□□□□ 0.73
NR1H2P55055 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NR1H2P55055 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H2P55055 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H2P55055 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NR1H2P55055 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NR1H2P55055 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H2P55055 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NR1H2P55055 SMG8-203ENST00000578922 2178 ntBASIC19.63■□□□□ 0.73
NR1H2P55055 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.63■□□□□ 0.73
NR1H2P55055 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.63■□□□□ 0.73
NR1H2P55055 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.63■□□□□ 0.73
NR1H2P55055 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NR1H2P55055 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H2P55055 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H2P55055 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H2P55055 AC105265.2-201ENST00000467189 838 ntBASIC19.63■□□□□ 0.73
NR1H2P55055 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.63■□□□□ 0.73
NR1H2P55055 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.63■□□□□ 0.73
NR1H2P55055 AC027682.1-201ENST00000562846 899 ntBASIC19.63■□□□□ 0.73
NR1H2P55055 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H2P55055 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.63■□□□□ 0.73
NR1H2P55055 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H2P55055 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.63■□□□□ 0.73
NR1H2P55055 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NR1H2P55055 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NR1H2P55055 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.62■□□□□ 0.73
NR1H2P55055 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NR1H2P55055 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NR1H2P55055 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.62■□□□□ 0.73
NR1H2P55055 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.62■□□□□ 0.73
NR1H2P55055 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.62■□□□□ 0.73
NR1H2P55055 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NR1H2P55055 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.62■□□□□ 0.73
NR1H2P55055 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NR1H2P55055 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.61■□□□□ 0.73
NR1H2P55055 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 RASA4CP-201ENST00000424092 1398 ntBASIC19.61■□□□□ 0.73
NR1H2P55055 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.61■□□□□ 0.73
NR1H2P55055 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NR1H2P55055 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.61■□□□□ 0.73
NR1H2P55055 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.61■□□□□ 0.73
NR1H2P55055 AC009086.3-201ENST00000623486 1008 ntBASIC19.61■□□□□ 0.73
NR1H2P55055 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NR1H2P55055 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.61■□□□□ 0.73
NR1H2P55055 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
NR1H2P55055 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NR1H2P55055 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.6■□□□□ 0.73
NR1H2P55055 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.6■□□□□ 0.73
NR1H2P55055 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.6■□□□□ 0.73
NR1H2P55055 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.6■□□□□ 0.73
NR1H2P55055 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NR1H2P55055 AC136469.2-201ENST00000623944 1028 ntBASIC19.6■□□□□ 0.73
NR1H2P55055 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NR1H2P55055 AC073314.1-201ENST00000568729 2216 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms