Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR4P51571 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.17■□□□□ 0.66
SSR4P51571 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR4P51571 EP400NL-214ENST00000641289 2402 ntBASIC19.16■□□□□ 0.66
SSR4P51571 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR4P51571 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR4P51571 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SSR4P51571 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SSR4P51571 AC091799.1-201ENST00000422823 811 ntBASIC19.16■□□□□ 0.66
SSR4P51571 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR4P51571 GUSBP6-202ENST00000438529 1198 ntBASIC19.16■□□□□ 0.66
SSR4P51571 AC016405.3-201ENST00000607710 860 ntBASIC19.16■□□□□ 0.66
SSR4P51571 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.16■□□□□ 0.66
SSR4P51571 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR4P51571 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SSR4P51571 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.16■□□□□ 0.66
SSR4P51571 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR4P51571 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSR4P51571 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
SSR4P51571 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSR4P51571 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SSR4P51571 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR4P51571 CDV3P1-201ENST00000471403 739 ntBASIC19.15■□□□□ 0.66
SSR4P51571 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.15■□□□□ 0.66
SSR4P51571 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR4P51571 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR4P51571 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSR4P51571 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
SSR4P51571 MKRN4P-201ENST00000444706 1521 ntBASIC19.15■□□□□ 0.66
SSR4P51571 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SSR4P51571 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSR4P51571 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SSR4P51571 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR4P51571 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR4P51571 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR4P51571 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SSR4P51571 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SSR4P51571 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR4P51571 AL512625.2-201ENST00000417533 625 ntBASIC19.14■□□□□ 0.65
SSR4P51571 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.14■□□□□ 0.65
SSR4P51571 RARRES2P4-201ENST00000514074 484 ntBASIC19.14■□□□□ 0.65
SSR4P51571 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.14■□□□□ 0.65
SSR4P51571 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.14■□□□□ 0.65
SSR4P51571 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR4P51571 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR4P51571 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR4P51571 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.14■□□□□ 0.65
SSR4P51571 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
SSR4P51571 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR4P51571 PKD1P6-201ENST00000343738 4769 ntBASIC19.14■□□□□ 0.65
SSR4P51571 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SSR4P51571 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SSR4P51571 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSR4P51571 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR4P51571 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR4P51571 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR4P51571 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR4P51571 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SSR4P51571 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SSR4P51571 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SSR4P51571 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.13■□□□□ 0.65
SSR4P51571 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.13■□□□□ 0.65
SSR4P51571 AC142086.2-201ENST00000569753 217 ntBASIC19.13■□□□□ 0.65
SSR4P51571 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.13■□□□□ 0.65
SSR4P51571 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.13■□□□□ 0.65
SSR4P51571 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SSR4P51571 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SSR4P51571 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR4P51571 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR4P51571 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR4P51571 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.13■□□□□ 0.65
SSR4P51571 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSR4P51571 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSR4P51571 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SSR4P51571 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SSR4P51571 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 AC244015.2-201ENST00000616358 1861 ntBASIC19.12■□□□□ 0.65
SSR4P51571 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.12■□□□□ 0.65
SSR4P51571 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.12■□□□□ 0.65
SSR4P51571 AC093787.1-201ENST00000450396 207 ntBASIC19.12■□□□□ 0.65
SSR4P51571 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.12■□□□□ 0.65
SSR4P51571 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.12■□□□□ 0.65
SSR4P51571 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSR4P51571 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR4P51571 FBXW4P1-201ENST00000426721 2239 ntBASIC19.12■□□□□ 0.65
SSR4P51571 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
SSR4P51571 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR4P51571 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR4P51571 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSR4P51571 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR4P51571 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR4P51571 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR4P51571 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms