Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CDV3P1-201ENST00000471403 739 ntBASIC23.15■■□□□ 1.3
CDK7P50613 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDK7P50613 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK7P50613 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.15■■□□□ 1.3
CDK7P50613 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.15■■□□□ 1.3
CDK7P50613 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK7P50613 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK7P50613 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDK7P50613 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDK7P50613 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDK7P50613 CLDN5-201ENST00000403084 2357 ntBASIC23.14■■□□□ 1.3
CDK7P50613 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CDK7P50613 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDK7P50613 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDK7P50613 MCRIP2P1-201ENST00000394346 511 ntBASIC23.14■■□□□ 1.29
CDK7P50613 KRT17P3-201ENST00000420566 1262 ntBASIC23.14■■□□□ 1.29
CDK7P50613 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDK7P50613 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.14■■□□□ 1.29
CDK7P50613 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDK7P50613 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDK7P50613 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.14■■□□□ 1.29
CDK7P50613 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.14■■□□□ 1.29
CDK7P50613 AL589743.5-201ENST00000616611 1050 ntBASIC23.14■■□□□ 1.29
CDK7P50613 FAM197Y4-202ENST00000622692 608 ntBASIC23.14■■□□□ 1.29
CDK7P50613 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
CDK7P50613 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDK7P50613 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
CDK7P50613 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDK7P50613 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDK7P50613 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CDK7P50613 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDK7P50613 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDK7P50613 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CDK7P50613 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.13■■□□□ 1.29
CDK7P50613 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDK7P50613 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDK7P50613 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDK7P50613 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.13■■□□□ 1.29
CDK7P50613 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.13■■□□□ 1.29
CDK7P50613 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
CDK7P50613 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.12■■□□□ 1.29
CDK7P50613 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CDK7P50613 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK7P50613 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK7P50613 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK7P50613 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK7P50613 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CDK7P50613 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
CDK7P50613 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.12■■□□□ 1.29
CDK7P50613 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.12■■□□□ 1.29
CDK7P50613 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDK7P50613 AC073912.3-201ENST00000624414 853 ntBASIC23.12■■□□□ 1.29
CDK7P50613 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK7P50613 AC068473.5-201ENST00000616428 2072 ntBASIC23.12■■□□□ 1.29
CDK7P50613 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CDK7P50613 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.11■■□□□ 1.29
CDK7P50613 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
CDK7P50613 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CDK7P50613 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK7P50613 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.11■■□□□ 1.29
CDK7P50613 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK7P50613 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK7P50613 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.11■■□□□ 1.29
CDK7P50613 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.11■■□□□ 1.29
CDK7P50613 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.11■■□□□ 1.29
CDK7P50613 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.11■■□□□ 1.29
CDK7P50613 AC233263.1-201ENST00000578059 224 ntBASIC23.11■■□□□ 1.29
CDK7P50613 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.11■■□□□ 1.29
CDK7P50613 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDK7P50613 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK7P50613 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDK7P50613 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDK7P50613 AC092368.3-202ENST00000574180 1591 ntBASIC23.1■■□□□ 1.29
CDK7P50613 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDK7P50613 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDK7P50613 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDK7P50613 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.1■■□□□ 1.29
CDK7P50613 KRT18P68-201ENST00000392293 1000 ntBASIC23.1■■□□□ 1.29
CDK7P50613 ECEL1P3-201ENST00000427961 737 ntBASIC23.1■■□□□ 1.29
CDK7P50613 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDK7P50613 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.1■■□□□ 1.29
CDK7P50613 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.1■■□□□ 1.29
CDK7P50613 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.1■■□□□ 1.29
CDK7P50613 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.1■■□□□ 1.29
CDK7P50613 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.1■■□□□ 1.29
CDK7P50613 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.1■■□□□ 1.29
CDK7P50613 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDK7P50613 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.09■■□□□ 1.29
CDK7P50613 AC245052.3-201ENST00000450182 901 ntBASIC23.09■■□□□ 1.29
CDK7P50613 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDK7P50613 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.09■■□□□ 1.29
CDK7P50613 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDK7P50613 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
CDK7P50613 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.09■■□□□ 1.29
CDK7P50613 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CDK7P50613 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.09■■□□□ 1.29
CDK7P50613 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.09■■□□□ 1.29
CDK7P50613 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
CDK7P50613 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDK7P50613 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms