Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.23■■□□□ 1.31
CPT1AP50416 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CPT1AP50416 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CPT1AP50416 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.23■■□□□ 1.31
CPT1AP50416 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.22■■□□□ 1.31
CPT1AP50416 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
CPT1AP50416 UNC93B4-201ENST00000505679 747 ntBASIC23.22■■□□□ 1.31
CPT1AP50416 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.22■■□□□ 1.31
CPT1AP50416 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CPT1AP50416 AC008403.3-201ENST00000598924 454 ntBASIC23.22■■□□□ 1.31
CPT1AP50416 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.22■■□□□ 1.31
CPT1AP50416 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CPT1AP50416 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPT1AP50416 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.21■■□□□ 1.31
CPT1AP50416 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPT1AP50416 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CPT1AP50416 RPS2P4-201ENST00000476944 856 ntBASIC23.21■■□□□ 1.31
CPT1AP50416 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CPT1AP50416 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPT1AP50416 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.21■■□□□ 1.31
CPT1AP50416 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.21■■□□□ 1.31
CPT1AP50416 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPT1AP50416 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CPT1AP50416 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPT1AP50416 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.2■■□□□ 1.3
CPT1AP50416 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CPT1AP50416 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.2■■□□□ 1.3
CPT1AP50416 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPT1AP50416 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPT1AP50416 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CPT1AP50416 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.2■■□□□ 1.3
CPT1AP50416 PNMA6B-201ENST00000538162 1200 ntBASIC23.2■■□□□ 1.3
CPT1AP50416 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CPT1AP50416 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPT1AP50416 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPT1AP50416 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 AC092368.3-202ENST00000574180 1591 ntBASIC23.19■■□□□ 1.3
CPT1AP50416 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.19■■□□□ 1.3
CPT1AP50416 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.19■■□□□ 1.3
CPT1AP50416 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.19■■□□□ 1.3
CPT1AP50416 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.19■■□□□ 1.3
CPT1AP50416 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.19■■□□□ 1.3
CPT1AP50416 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPT1AP50416 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
CPT1AP50416 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CPT1AP50416 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CPT1AP50416 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.18■■□□□ 1.3
CPT1AP50416 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.18■■□□□ 1.3
CPT1AP50416 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPT1AP50416 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.18■■□□□ 1.3
CPT1AP50416 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CPT1AP50416 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.18■■□□□ 1.3
CPT1AP50416 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.18■■□□□ 1.3
CPT1AP50416 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPT1AP50416 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.18■■□□□ 1.3
CPT1AP50416 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CPT1AP50416 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.18■■□□□ 1.3
CPT1AP50416 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.18■■□□□ 1.3
CPT1AP50416 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.18■■□□□ 1.3
CPT1AP50416 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.18■■□□□ 1.3
CPT1AP50416 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.18■■□□□ 1.3
CPT1AP50416 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.18■■□□□ 1.3
CPT1AP50416 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPT1AP50416 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.18■■□□□ 1.3
CPT1AP50416 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPT1AP50416 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CPT1AP50416 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPT1AP50416 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPT1AP50416 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPT1AP50416 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CPT1AP50416 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPT1AP50416 UBE2SP1-201ENST00000450587 669 ntBASIC23.17■■□□□ 1.3
CPT1AP50416 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CPT1AP50416 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPT1AP50416 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPT1AP50416 CYP21A1P-202ENST00000354927 1481 ntBASIC23.17■■□□□ 1.3
CPT1AP50416 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPT1AP50416 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPT1AP50416 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPT1AP50416 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CPT1AP50416 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPT1AP50416 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms