Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC6A12P48065 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.15■□□□□ 0.82
SLC6A12P48065 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC6A12P48065 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A12P48065 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A12P48065 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC6A12P48065 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SLC6A12P48065 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC6A12P48065 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SLC6A12P48065 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC6A12P48065 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.14■□□□□ 0.81
SLC6A12P48065 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC6A12P48065 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SLC6A12P48065 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC6A12P48065 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC6A12P48065 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC6A12P48065 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A12P48065 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A12P48065 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A12P48065 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SLC6A12P48065 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A12P48065 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A12P48065 AC034268.1-201ENST00000441047 882 ntBASIC20.13■□□□□ 0.81
SLC6A12P48065 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC6A12P48065 AC087623.3-201ENST00000607047 1098 ntBASIC20.13■□□□□ 0.81
SLC6A12P48065 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SLC6A12P48065 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A12P48065 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A12P48065 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC6A12P48065 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SLC6A12P48065 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC6A12P48065 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC6A12P48065 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SLC6A12P48065 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A12P48065 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLC6A12P48065 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A12P48065 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A12P48065 KRT19P1-201ENST00000405746 1186 ntBASIC20.12■□□□□ 0.81
SLC6A12P48065 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC6A12P48065 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.12■□□□□ 0.81
SLC6A12P48065 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLC6A12P48065 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A12P48065 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A12P48065 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A12P48065 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A12P48065 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC6A12P48065 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SLC6A12P48065 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
SLC6A12P48065 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC6A12P48065 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC6A12P48065 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 AC245052.3-201ENST00000450182 901 ntBASIC20.11■□□□□ 0.81
SLC6A12P48065 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC6A12P48065 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC6A12P48065 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC6A12P48065 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.11■□□□□ 0.81
SLC6A12P48065 AC011484.1-201ENST00000377652 1995 ntBASIC20.11■□□□□ 0.81
SLC6A12P48065 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SLC6A12P48065 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC6A12P48065 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC6A12P48065 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC6A12P48065 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC6A12P48065 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SLC6A12P48065 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 SLC7A5P1-201ENST00000568957 537 ntBASIC20.1■□□□□ 0.81
SLC6A12P48065 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC6A12P48065 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC6A12P48065 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SLC6A12P48065 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms