Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 tF(GAA)MtF(GAA)M 73 nt1.94□□□□□ -2.1
TY1B-JR1P47098 tF(GAA)P1tF(GAA)P1 73 nt1.94□□□□□ -2.1
TY1B-JR1P47098 tF(GAA)P2tF(GAA)P2 73 nt1.94□□□□□ -2.1
TY1B-JR1P47098 MMS22YLR320W 4365 nt1.94□□□□□ -2.1
TY1B-JR1P47098 SMP3YOR149C 1551 nt1.94□□□□□ -2.1
TY1B-JR1P47098 VPS38YLR360W 1320 nt1.94□□□□□ -2.1
TY1B-JR1P47098 PET100YDR079W 336 nt1.93□□□□□ -2.1
TY1B-JR1P47098 EAF7YNL136W 1278 nt1.93□□□□□ -2.1
TY1B-JR1P47098 CTM1YHR109W 1758 nt1.93□□□□□ -2.1
TY1B-JR1P47098 VPS15YBR097W 4365 nt1.93□□□□□ -2.1
TY1B-JR1P47098 YJR061WYJR061W 2808 nt1.93□□□□□ -2.1
TY1B-JR1P47098 AAR2YBL074C 1068 nt1.93□□□□□ -2.1
TY1B-JR1P47098 CRS5YOR031W 210 nt1.93□□□□□ -2.1
TY1B-JR1P47098 HOP1YIL072W 1818 nt1.92□□□□□ -2.1
TY1B-JR1P47098 NPL4YBR170C 1743 nt1.92□□□□□ -2.1
TY1B-JR1P47098 MCM21YDR318W 1107 nt1.92□□□□□ -2.1
TY1B-JR1P47098 FRQ1YDR373W 573 nt1.92□□□□□ -2.1
TY1B-JR1P47098 MBA1YBR185C 837 nt1.92□□□□□ -2.1
TY1B-JR1P47098 RLI1YDR091C 1827 nt1.92□□□□□ -2.1
TY1B-JR1P47098 DSE4YNR067C 3354 nt1.91□□□□□ -2.1
TY1B-JR1P47098 RRF1YHR038W 693 nt1.91□□□□□ -2.1
TY1B-JR1P47098 CYC2YOR037W 1101 nt1.91□□□□□ -2.1
TY1B-JR1P47098 YHR214C-CYHR214C-C 1437 nt1.91□□□□□ -2.1
TY1B-JR1P47098 CNM67YNL225C 1746 nt1.91□□□□□ -2.1
TY1B-JR1P47098 YCK2YNL154C 1641 nt1.9□□□□□ -2.1
TY1B-JR1P47098 EST3YIL009C-A 546 nt1.9□□□□□ -2.1
TY1B-JR1P47098 YOL166CYOL166C 339 nt1.9□□□□□ -2.1
TY1B-JR1P47098 YRR1YOR162C 2433 nt1.9□□□□□ -2.11
TY1B-JR1P47098 NDC80YIL144W 2076 nt1.9□□□□□ -2.11
TY1B-JR1P47098 MRPL9YGR220C 810 nt1.9□□□□□ -2.11
TY1B-JR1P47098 COS6YGR295C 1146 nt1.9□□□□□ -2.11
TY1B-JR1P47098 YIL156W-AYIL156W-A 402 nt1.9□□□□□ -2.11
TY1B-JR1P47098 RMP1YLR145W 606 nt1.9□□□□□ -2.11
TY1B-JR1P47098 MRPL27YBR282W 441 nt1.9□□□□□ -2.11
TY1B-JR1P47098 GRX1YCL035C 333 nt1.9□□□□□ -2.11
TY1B-JR1P47098 SEC15YGL233W 2733 nt1.9□□□□□ -2.11
TY1B-JR1P47098 SOK1YDR006C 2706 nt1.89□□□□□ -2.11
TY1B-JR1P47098 YCK3YER123W 1575 nt1.89□□□□□ -2.11
TY1B-JR1P47098 VPH2YKL119C 648 nt1.89□□□□□ -2.11
TY1B-JR1P47098 ESF2YNR054C 951 nt1.89□□□□□ -2.11
TY1B-JR1P47098 PLP1YDR183W 693 nt1.88□□□□□ -2.11
TY1B-JR1P47098 DCG1YIR030C 735 nt1.88□□□□□ -2.11
TY1B-JR1P47098 IST1YNL265C 897 nt1.88□□□□□ -2.11
TY1B-JR1P47098 HAL1YPR005C 885 nt1.88□□□□□ -2.11
TY1B-JR1P47098 YGR237CYGR237C 2358 nt1.88□□□□□ -2.11
TY1B-JR1P47098 RDS2YPL133C 1341 nt1.88□□□□□ -2.11
TY1B-JR1P47098 SIP4YJL089W 2490 nt1.88□□□□□ -2.11
TY1B-JR1P47098 ISW2YOR304W 3363 nt1.88□□□□□ -2.11
TY1B-JR1P47098 MSN5YDR335W 3675 nt1.88□□□□□ -2.11
TY1B-JR1P47098 UBC6YER100W 753 nt1.87□□□□□ -2.11
TY1B-JR1P47098 RPS29AYLR388W 171 nt1.87□□□□□ -2.11
TY1B-JR1P47098 REG1YDR028C 3045 nt1.87□□□□□ -2.11
TY1B-JR1P47098 PKH3YDR466W 2697 nt1.87□□□□□ -2.11
TY1B-JR1P47098 STP1YDR463W 1560 nt1.87□□□□□ -2.11
TY1B-JR1P47098 DBP5YOR046C 1449 nt1.87□□□□□ -2.11
TY1B-JR1P47098 SPH1YLR313C 1593 nt1.87□□□□□ -2.11
TY1B-JR1P47098 ARG2YJL071W 1725 nt1.86□□□□□ -2.11
TY1B-JR1P47098 ATP25YMR098C 1839 nt1.86□□□□□ -2.11
TY1B-JR1P47098 YCR087C-AYCR087C-A 462 nt1.86□□□□□ -2.11
TY1B-JR1P47098 YOR029WYOR029W 336 nt1.86□□□□□ -2.11
TY1B-JR1P47098 IRC21YMR073C 606 nt1.85□□□□□ -2.11
TY1B-JR1P47098 AEP2YMR282C 1743 nt1.85□□□□□ -2.11
TY1B-JR1P47098 INP51YIL002C 2841 nt1.85□□□□□ -2.11
TY1B-JR1P47098 YJR003CYJR003C 1560 nt1.85□□□□□ -2.11
TY1B-JR1P47098 MIC60YKR016W 1623 nt1.85□□□□□ -2.11
TY1B-JR1P47098 CDC53YDL132W 2448 nt1.85□□□□□ -2.11
TY1B-JR1P47098 TCM62YBR044C 1719 nt1.84□□□□□ -2.11
TY1B-JR1P47098 CIK1YMR198W 1785 nt1.84□□□□□ -2.11
TY1B-JR1P47098 OCT1YKL134C 2319 nt1.84□□□□□ -2.11
TY1B-JR1P47098 FYV8YGR196C 2454 nt1.84□□□□□ -2.12
TY1B-JR1P47098 SHE2YKL130C 741 nt1.84□□□□□ -2.12
TY1B-JR1P47098 AFI1YOR129C 2682 nt1.84□□□□□ -2.12
TY1B-JR1P47098 YDR179W-AYDR179W-A 1392 nt1.84□□□□□ -2.12
TY1B-JR1P47098 BUR6YER159C 429 nt1.83□□□□□ -2.12
TY1B-JR1P47098 YBR089WYBR089W 600 nt1.83□□□□□ -2.12
TY1B-JR1P47098 snR3snR3 194 nt1.83□□□□□ -2.12
TY1B-JR1P47098 KCS1YDR017C 3153 nt1.83□□□□□ -2.12
TY1B-JR1P47098 YDL073WYDL073W 2955 nt1.83□□□□□ -2.12
TY1B-JR1P47098 PRM2YIL037C 1971 nt1.83□□□□□ -2.12
TY1B-JR1P47098 YCR050CYCR050C 309 nt1.82□□□□□ -2.12
TY1B-JR1P47098 DDI2YFL061W 678 nt1.82□□□□□ -2.12
TY1B-JR1P47098 CTP1YBR291C 900 nt1.82□□□□□ -2.12
TY1B-JR1P47098 YFL002W-AYFL002W-A 5313 nt1.82□□□□□ -2.12
TY1B-JR1P47098 YGR161W-BYGR161W-B 5313 nt1.82□□□□□ -2.12
TY1B-JR1P47098 YCL019WYCL019W 5313 nt1.82□□□□□ -2.12
TY1B-JR1P47098 SPP382YLR424W 2127 nt1.82□□□□□ -2.12
TY1B-JR1P47098 UBR1YGR184C 5853 nt1.82□□□□□ -2.12
TY1B-JR1P47098 QCR9YGR183C 201 nt1.82□□□□□ -2.12
TY1B-JR1P47098 RPL33BYOR234C 324 nt1.82□□□□□ -2.12
TY1B-JR1P47098 YLR035C-AYLR035C-A 3468 nt1.81□□□□□ -2.12
TY1B-JR1P47098 SPO22YIL073C 2928 nt1.81□□□□□ -2.12
TY1B-JR1P47098 ZRG17YNR039C 1818 nt1.81□□□□□ -2.12
TY1B-JR1P47098 RPN9YDR427W 1182 nt1.81□□□□□ -2.12
TY1B-JR1P47098 YER023C-AYER023C-A 213 nt1.81□□□□□ -2.12
TY1B-JR1P47098 PRP18YGR006W 756 nt1.81□□□□□ -2.12
TY1B-JR1P47098 YOR292CYOR292C 930 nt1.81□□□□□ -2.12
TY1B-JR1P47098 RGP1YDR137W 1992 nt1.81□□□□□ -2.12
TY1B-JR1P47098 PRP38YGR075C 729 nt1.8□□□□□ -2.12
TY1B-JR1P47098 SPO13YHR014W 876 nt1.8□□□□□ -2.12
TY1B-JR1P47098 TOM1YDR457W 9807 nt1.8□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 80.6 ms