Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YMR013C-AYMR013C-A 150 nt4.35□□□□□ -1.71
VPS53P47061 PDR17YNL264C 1053 nt4.35□□□□□ -1.71
VPS53P47061 COQ10YOL008W 624 nt4.35□□□□□ -1.71
VPS53P47061 NUG1YER006W 1563 nt4.35□□□□□ -1.71
VPS53P47061 RNA14YMR061W 2034 nt4.34□□□□□ -1.71
VPS53P47061 YCR045W-AYCR045W-A 351 nt4.34□□□□□ -1.71
VPS53P47061 YDR340WYDR340W 303 nt4.34□□□□□ -1.71
VPS53P47061 YJR079WYJR079W 330 nt4.34□□□□□ -1.71
VPS53P47061 YKL068W-AYKL068W-A 237 nt4.34□□□□□ -1.71
VPS53P47061 RPS16AYMR143W 432 nt4.34□□□□□ -1.71
VPS53P47061 YMR304C-AYMR304C-A 351 nt4.34□□□□□ -1.71
VPS53P47061 FAA1YOR317W 2103 nt4.34□□□□□ -1.71
VPS53P47061 RDH54YBR073W 2877 nt4.33□□□□□ -1.72
VPS53P47061 RRI2YOL117W 1938 nt4.33□□□□□ -1.72
VPS53P47061 SHS1YDL225W 1656 nt4.33□□□□□ -1.72
VPS53P47061 PPQ1YPL179W 1650 nt4.33□□□□□ -1.72
VPS53P47061 PEP7YDR323C 1548 nt4.33□□□□□ -1.72
VPS53P47061 SEN54YPL083C 1404 nt4.33□□□□□ -1.72
VPS53P47061 YDR230WYDR230W 348 nt4.33□□□□□ -1.72
VPS53P47061 LIF1YGL090W 1266 nt4.33□□□□□ -1.72
VPS53P47061 YHI9YHR029C 885 nt4.33□□□□□ -1.72
VPS53P47061 ABM1YJR108W 372 nt4.33□□□□□ -1.72
VPS53P47061 YLR428CYLR428C 345 nt4.33□□□□□ -1.72
VPS53P47061 YNL184CYNL184C 327 nt4.33□□□□□ -1.72
VPS53P47061 IST1YNL265C 897 nt4.33□□□□□ -1.72
VPS53P47061 RPC40YPR110C 1008 nt4.33□□□□□ -1.72
VPS53P47061 LRG1YDL240W 3054 nt4.32□□□□□ -1.72
VPS53P47061 RPS14AYCR031C 414 nt4.32□□□□□ -1.72
VPS53P47061 EMC2YJR088C 879 nt4.32□□□□□ -1.72
VPS53P47061 YMR141CYMR141C 309 nt4.32□□□□□ -1.72
VPS53P47061 AAR2YBL074C 1068 nt4.32□□□□□ -1.72
VPS53P47061 NDC80YIL144W 2076 nt4.32□□□□□ -1.72
VPS53P47061 TGL3YMR313C 1929 nt4.32□□□□□ -1.72
VPS53P47061 YSH1YLR277C 2340 nt4.32□□□□□ -1.72
VPS53P47061 YML096WYML096W 1578 nt4.31□□□□□ -1.72
VPS53P47061 SPE1YKL184W 1401 nt4.31□□□□□ -1.72
VPS53P47061 ATG2YNL242W 4779 nt4.31□□□□□ -1.72
VPS53P47061 BUD5YCR038C 1929 nt4.31□□□□□ -1.72
VPS53P47061 PUB1YNL016W 1362 nt4.31□□□□□ -1.72
VPS53P47061 MNR2YKL064W 2910 nt4.31□□□□□ -1.72
VPS53P47061 EPO1YMR124W 2832 nt4.31□□□□□ -1.72
VPS53P47061 ULS1YOR191W 4860 nt4.31□□□□□ -1.72
VPS53P47061 AAD3YCR107W 1092 nt4.31□□□□□ -1.72
VPS53P47061 snR68snR68 136 nt4.31□□□□□ -1.72
VPS53P47061 RPB3YIL021W 957 nt4.31□□□□□ -1.72
VPS53P47061 YJL169WYJL169W 369 nt4.31□□□□□ -1.72
VPS53P47061 YLR269CYLR269C 351 nt4.31□□□□□ -1.72
VPS53P47061 ATX1YNL259C 222 nt4.31□□□□□ -1.72
VPS53P47061 UBP12YJL197W 3765 nt4.31□□□□□ -1.72
VPS53P47061 VPS45YGL095C 1734 nt4.31□□□□□ -1.72
VPS53P47061 HFD1YMR110C 1599 nt4.31□□□□□ -1.72
VPS53P47061 YJR098CYJR098C 1971 nt4.31□□□□□ -1.72
VPS53P47061 YBR238CYBR238C 2196 nt4.3□□□□□ -1.72
VPS53P47061 YDL199CYDL199C 2064 nt4.3□□□□□ -1.72
VPS53P47061 YCR090CYCR090C 549 nt4.3□□□□□ -1.72
VPS53P47061 IRC2YDR112W 309 nt4.3□□□□□ -1.72
VPS53P47061 YDR149CYDR149C 708 nt4.3□□□□□ -1.72
VPS53P47061 YJL086CYJL086C 369 nt4.3□□□□□ -1.72
VPS53P47061 YLR076CYLR076C 423 nt4.3□□□□□ -1.72
VPS53P47061 IRC16YPR038W 360 nt4.3□□□□□ -1.72
VPS53P47061 DPB3YBR278W 606 nt4.3□□□□□ -1.72
VPS53P47061 POL1YNL102W 4407 nt4.3□□□□□ -1.72
VPS53P47061 NUP133YKR082W 3474 nt4.3□□□□□ -1.72
VPS53P47061 HDA2YDR295C 2025 nt4.29□□□□□ -1.72
VPS53P47061 ULP1YPL020C 1866 nt4.29□□□□□ -1.72
VPS53P47061 MAM33YIL070C 801 nt4.29□□□□□ -1.72
VPS53P47061 YKL118WYKL118W 312 nt4.29□□□□□ -1.72
VPS53P47061 YBL039W-BYBL039W-B 180 nt4.29□□□□□ -1.72
VPS53P47061 NOP15YNL110C 663 nt4.29□□□□□ -1.72
VPS53P47061 YOR282WYOR282W 321 nt4.29□□□□□ -1.72
VPS53P47061 MDM36YPR083W 1740 nt4.29□□□□□ -1.72
VPS53P47061 GDI1YER136W 1356 nt4.28□□□□□ -1.72
VPS53P47061 SSF1YHR066W 1362 nt4.28□□□□□ -1.72
VPS53P47061 LOS1YKL205W 3303 nt4.28□□□□□ -1.72
VPS53P47061 PGS1YCL004W 1566 nt4.28□□□□□ -1.72
VPS53P47061 BRE5YNR051C 1548 nt4.28□□□□□ -1.72
VPS53P47061 SRD1YCR018C 666 nt4.28□□□□□ -1.72
VPS53P47061 YDL071CYDL071C 375 nt4.28□□□□□ -1.72
VPS53P47061 MIC19YFR011C 513 nt4.28□□□□□ -1.72
VPS53P47061 AIM26YKL037W 357 nt4.28□□□□□ -1.72
VPS53P47061 MRPL31YKL138C 396 nt4.28□□□□□ -1.72
VPS53P47061 PAM18YLR008C 507 nt4.28□□□□□ -1.72
VPS53P47061 INO4YOL108C 456 nt4.28□□□□□ -1.72
VPS53P47061 YBR032WYBR032W 303 nt4.28□□□□□ -1.72
VPS53P47061 ROX1YPR065W 1107 nt4.28□□□□□ -1.72
VPS53P47061 MNL1YHR204W 2391 nt4.28□□□□□ -1.72
VPS53P47061 PTA1YAL043C 2358 nt4.28□□□□□ -1.72
VPS53P47061 PSP1YDR505C 2526 nt4.27□□□□□ -1.73
VPS53P47061 RPL11BYGR085C 525 nt4.27□□□□□ -1.73
VPS53P47061 HIS5YIL116W 1158 nt4.27□□□□□ -1.73
VPS53P47061 YMR031W-AYMR031W-A 327 nt4.27□□□□□ -1.73
VPS53P47061 YPT53YNL093W 663 nt4.27□□□□□ -1.73
VPS53P47061 CDC33YOL139C 642 nt4.27□□□□□ -1.73
VPS53P47061 RPL11AYPR102C 525 nt4.27□□□□□ -1.73
VPS53P47061 YNR063WYNR063W 1824 nt4.27□□□□□ -1.73
VPS53P47061 STI1YOR027W 1770 nt4.27□□□□□ -1.73
VPS53P47061 HOS3YPL116W 2094 nt4.26□□□□□ -1.73
VPS53P47061 YHL026CYHL026C 948 nt4.26□□□□□ -1.73
VPS53P47061 NBL1YHR199C-A 222 nt4.26□□□□□ -1.73
VPS53P47061 YLR434CYLR434C 384 nt4.26□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms