Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 TEX1YNL253W 1269 nt1.95□□□□□ -2.1
CUP9P41817 YOL057WYOL057W 2136 nt1.95□□□□□ -2.1
CUP9P41817 ARF3YOR094W 552 nt1.95□□□□□ -2.1
CUP9P41817 FIG1YBR040W 897 nt1.95□□□□□ -2.1
CUP9P41817 PRM4YPL156C 855 nt1.95□□□□□ -2.1
CUP9P41817 RRG8YPR116W 834 nt1.95□□□□□ -2.1
CUP9P41817 SEC66YBR171W 621 nt1.95□□□□□ -2.1
CUP9P41817 AIM4YBR194W 372 nt1.95□□□□□ -2.1
CUP9P41817 GRX1YCL035C 333 nt1.95□□□□□ -2.1
CUP9P41817 DUG2YBR281C 2637 nt1.95□□□□□ -2.1
CUP9P41817 RRP14YKL082C 1305 nt1.94□□□□□ -2.1
CUP9P41817 ATP22YDR350C 2055 nt1.94□□□□□ -2.1
CUP9P41817 KAP123YER110C 3342 nt1.94□□□□□ -2.1
CUP9P41817 UPF3YGR072W 1164 nt1.94□□□□□ -2.1
CUP9P41817 PCL7YIL050W 858 nt1.94□□□□□ -2.1
CUP9P41817 RGI2YIL057C 495 nt1.94□□□□□ -2.1
CUP9P41817 ARC19YKL013C 516 nt1.94□□□□□ -2.1
CUP9P41817 YKL070WYKL070W 510 nt1.94□□□□□ -2.1
CUP9P41817 YAL059C-AYAL059C-A 423 nt1.94□□□□□ -2.1
CUP9P41817 DAD3YBR233W-A 285 nt1.94□□□□□ -2.1
CUP9P41817 GDI1YER136W 1356 nt1.94□□□□□ -2.1
CUP9P41817 YOL098CYOL098C 3114 nt1.94□□□□□ -2.1
CUP9P41817 CLN2YPL256C 1638 nt1.94□□□□□ -2.1
CUP9P41817 POL4YCR014C 1749 nt1.94□□□□□ -2.1
CUP9P41817 SEN54YPL083C 1404 nt1.93□□□□□ -2.1
CUP9P41817 MED2YDL005C 1296 nt1.93□□□□□ -2.1
CUP9P41817 MRP10YDL045W-A 288 nt1.93□□□□□ -2.1
CUP9P41817 RPL13AYDL082W 600 nt1.93□□□□□ -2.1
CUP9P41817 PET100YDR079W 336 nt1.93□□□□□ -2.1
CUP9P41817 YDR320W-BYDR320W-B 138 nt1.93□□□□□ -2.1
CUP9P41817 TIM11YDR322C-A 291 nt1.93□□□□□ -2.1
CUP9P41817 OTU2YHL013C 924 nt1.93□□□□□ -2.1
CUP9P41817 YLR363W-AYLR363W-A 258 nt1.93□□□□□ -2.1
CUP9P41817 PRM6YML047C 1059 nt1.93□□□□□ -2.1
CUP9P41817 TAF4YMR005W 1167 nt1.93□□□□□ -2.1
CUP9P41817 BTS1YPL069C 1008 nt1.93□□□□□ -2.1
CUP9P41817 YCL001W-AYCL001W-A 462 nt1.93□□□□□ -2.1
CUP9P41817 SLY41YOR307C 1362 nt1.93□□□□□ -2.1
CUP9P41817 GYP5YPL249C 2685 nt1.92□□□□□ -2.1
CUP9P41817 TOF1YNL273W 3717 nt1.92□□□□□ -2.1
CUP9P41817 YFR032C-BYFR032C-B 264 nt1.92□□□□□ -2.1
CUP9P41817 ERV1YGR029W 570 nt1.92□□□□□ -2.1
CUP9P41817 YJL052C-AYJL052C-A 120 nt1.92□□□□□ -2.1
CUP9P41817 MSA2YKR077W 1092 nt1.92□□□□□ -2.1
CUP9P41817 PDR17YNL264C 1053 nt1.92□□□□□ -2.1
CUP9P41817 TPT1YOL102C 693 nt1.92□□□□□ -2.1
CUP9P41817 YPL142CYPL142C 318 nt1.92□□□□□ -2.1
CUP9P41817 EDS1YBR033W 2760 nt1.92□□□□□ -2.1
CUP9P41817 PEX5YDR244W 1839 nt1.91□□□□□ -2.1
CUP9P41817 MAK5YBR142W 2322 nt1.91□□□□□ -2.1
CUP9P41817 HRD3YLR207W 2502 nt1.91□□□□□ -2.1
CUP9P41817 YDL186WYDL186W 834 nt1.91□□□□□ -2.1
CUP9P41817 HLR1YDR528W 1272 nt1.91□□□□□ -2.1
CUP9P41817 YGL006W-AYGL006W-A 111 nt1.91□□□□□ -2.1
CUP9P41817 EDC1YGL222C 528 nt1.91□□□□□ -2.1
CUP9P41817 YGR111WYGR111W 1203 nt1.91□□□□□ -2.1
CUP9P41817 BLS1YLR408C 369 nt1.91□□□□□ -2.1
CUP9P41817 PEX17YNL214W 600 nt1.91□□□□□ -2.1
CUP9P41817 RPL25YOL127W 429 nt1.91□□□□□ -2.1
CUP9P41817 YOR277CYOR277C 309 nt1.91□□□□□ -2.1
CUP9P41817 DPB3YBR278W 606 nt1.91□□□□□ -2.1
CUP9P41817 SWA2YDR320C 2007 nt1.91□□□□□ -2.1
CUP9P41817 SAP185YJL098W 3177 nt1.9□□□□□ -2.1
CUP9P41817 YIR023C-AYIR023C-A 324 nt1.9□□□□□ -2.11
CUP9P41817 YJL169WYJL169W 369 nt1.9□□□□□ -2.11
CUP9P41817 YKL165C-AYKL165C-A 234 nt1.9□□□□□ -2.11
CUP9P41817 EBP2YKL172W 1284 nt1.9□□□□□ -2.11
CUP9P41817 SRL3YKR091W 741 nt1.9□□□□□ -2.11
CUP9P41817 CWC24YLR323C 780 nt1.9□□□□□ -2.11
CUP9P41817 ADI1YMR009W 540 nt1.9□□□□□ -2.11
CUP9P41817 MCT1YOR221C 1083 nt1.9□□□□□ -2.11
CUP9P41817 HMT1YBR034C 1047 nt1.9□□□□□ -2.11
CUP9P41817 YPR142CYPR142C 564 nt1.9□□□□□ -2.11
CUP9P41817 CBP6YBR120C 489 nt1.9□□□□□ -2.11
CUP9P41817 YCL007CYCL007C 393 nt1.9□□□□□ -2.11
CUP9P41817 URB2YJR041C 3525 nt1.89□□□□□ -2.11
CUP9P41817 IRC8YJL051W 2469 nt1.89□□□□□ -2.11
CUP9P41817 BRE1YDL074C 2103 nt1.89□□□□□ -2.11
CUP9P41817 YDR537CYDR537C 606 nt1.89□□□□□ -2.11
CUP9P41817 POP6YGR030C 477 nt1.89□□□□□ -2.11
CUP9P41817 SAY1YGR263C 1275 nt1.89□□□□□ -2.11
CUP9P41817 RPA12YJR063W 378 nt1.89□□□□□ -2.11
CUP9P41817 FIP1YJR093C 984 nt1.89□□□□□ -2.11
CUP9P41817 POP8YBL018C 402 nt1.89□□□□□ -2.11
CUP9P41817 YOL134CYOL134C 390 nt1.89□□□□□ -2.11
CUP9P41817 ATG5YPL149W 885 nt1.89□□□□□ -2.11
CUP9P41817 VMA9YCL005W-A 222 nt1.89□□□□□ -2.11
CUP9P41817 YNL193WYNL193W 1677 nt1.89□□□□□ -2.11
CUP9P41817 DBF20YPR111W 1695 nt1.89□□□□□ -2.11
CUP9P41817 FMN1YDR236C 657 nt1.88□□□□□ -2.11
CUP9P41817 DAD4YDR320C-A 219 nt1.88□□□□□ -2.11
CUP9P41817 RSR1YGR152C 819 nt1.88□□□□□ -2.11
CUP9P41817 YHR180W-AYHR180W-A 183 nt1.88□□□□□ -2.11
CUP9P41817 MMF1YIL051C 438 nt1.88□□□□□ -2.11
CUP9P41817 BET5YML077W 480 nt1.88□□□□□ -2.11
CUP9P41817 COQ10YOL008W 624 nt1.88□□□□□ -2.11
CUP9P41817 ISU1YPL135W 498 nt1.88□□□□□ -2.11
CUP9P41817 YBR201C-AYBR201C-A 204 nt1.88□□□□□ -2.11
CUP9P41817 NEL1YHR035W 1893 nt1.88□□□□□ -2.11
CUP9P41817 PEX8YGR077C 1770 nt1.87□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms