Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.55■■■□□ 2.64
KDM5CP41229 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
KDM5CP41229 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
KDM5CP41229 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.55■■■□□ 2.64
KDM5CP41229 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.55■■■□□ 2.64
KDM5CP41229 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
KDM5CP41229 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
KDM5CP41229 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
KDM5CP41229 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.54■■■□□ 2.64
KDM5CP41229 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.54■■■□□ 2.64
KDM5CP41229 AC012306.2-201ENST00000609350 630 ntBASIC31.54■■■□□ 2.64
KDM5CP41229 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KDM5CP41229 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.54■■■□□ 2.64
KDM5CP41229 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC31.53■■■□□ 2.64
KDM5CP41229 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 RPS2P55-201ENST00000397318 883 ntBASIC31.53■■■□□ 2.64
KDM5CP41229 TSPY7P-201ENST00000431358 1114 ntBASIC31.53■■■□□ 2.64
KDM5CP41229 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.53■■■□□ 2.64
KDM5CP41229 AC107956.1-201ENST00000494359 873 ntBASIC31.53■■■□□ 2.64
KDM5CP41229 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC31.53■■■□□ 2.64
KDM5CP41229 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
KDM5CP41229 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
KDM5CP41229 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
KDM5CP41229 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC31.52■■■□□ 2.64
KDM5CP41229 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
KDM5CP41229 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KDM5CP41229 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
KDM5CP41229 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
KDM5CP41229 AC133681.1-201ENST00000465482 601 ntBASIC31.51■■■□□ 2.64
KDM5CP41229 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
KDM5CP41229 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.51■■■□□ 2.64
KDM5CP41229 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC31.51■■■□□ 2.64
KDM5CP41229 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC31.51■■■□□ 2.64
KDM5CP41229 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.64
KDM5CP41229 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
KDM5CP41229 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
KDM5CP41229 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
KDM5CP41229 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
KDM5CP41229 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
KDM5CP41229 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.63
KDM5CP41229 AC124016.1-201ENST00000609552 612 ntBASIC31.51■■■□□ 2.63
KDM5CP41229 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.5■■■□□ 2.63
KDM5CP41229 CYP21A1P-202ENST00000354927 1481 ntBASIC31.5■■■□□ 2.63
KDM5CP41229 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
KDM5CP41229 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC31.5■■■□□ 2.63
KDM5CP41229 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
KDM5CP41229 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.5■■■□□ 2.63
KDM5CP41229 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
KDM5CP41229 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC31.5■■■□□ 2.63
KDM5CP41229 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC31.5■■■□□ 2.63
KDM5CP41229 PTPA-214ENST00000423100 988 ntTSL 2 BASIC31.5■■■□□ 2.63
KDM5CP41229 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC31.5■■■□□ 2.63
KDM5CP41229 REXO1L12P-201ENST00000622156 912 ntBASIC31.5■■■□□ 2.63
KDM5CP41229 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
KDM5CP41229 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
KDM5CP41229 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
KDM5CP41229 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
KDM5CP41229 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC31.49■■■□□ 2.63
KDM5CP41229 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC31.49■■■□□ 2.63
KDM5CP41229 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
KDM5CP41229 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
KDM5CP41229 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC31.49■■■□□ 2.63
KDM5CP41229 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC31.49■■■□□ 2.63
KDM5CP41229 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KDM5CP41229 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC31.49■■■□□ 2.63
KDM5CP41229 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.49■■■□□ 2.63
KDM5CP41229 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.49■■■□□ 2.63
KDM5CP41229 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
KDM5CP41229 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31.49■■■□□ 2.63
KDM5CP41229 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC31.49■■■□□ 2.63
KDM5CP41229 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KDM5CP41229 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.49■■■□□ 2.63
KDM5CP41229 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
KDM5CP41229 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC31.48■■■□□ 2.63
KDM5CP41229 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
KDM5CP41229 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.48■■■□□ 2.63
KDM5CP41229 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC31.48■■■□□ 2.63
KDM5CP41229 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC31.48■■■□□ 2.63
KDM5CP41229 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
KDM5CP41229 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
KDM5CP41229 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC31.48■■■□□ 2.63
KDM5CP41229 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
KDM5CP41229 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
KDM5CP41229 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC31.48■■■□□ 2.63
KDM5CP41229 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
KDM5CP41229 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC31.47■■■□□ 2.63
KDM5CP41229 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
KDM5CP41229 MFF-205ENST00000354503 1085 ntTSL 2 BASIC31.47■■■□□ 2.63
KDM5CP41229 AC007322.3-201ENST00000426526 701 ntBASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms