Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.05■□□□□ 0.96
HADHAP40939 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HADHAP40939 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HADHAP40939 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HADHAP40939 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.04■□□□□ 0.96
HADHAP40939 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.04■□□□□ 0.96
HADHAP40939 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.04■□□□□ 0.96
HADHAP40939 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.04■□□□□ 0.96
HADHAP40939 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 MIR6821-201ENST00000617625 74 ntBASIC21.04■□□□□ 0.96
HADHAP40939 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.04■□□□□ 0.96
HADHAP40939 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HADHAP40939 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHAP40939 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHAP40939 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.03■□□□□ 0.96
HADHAP40939 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.03■□□□□ 0.96
HADHAP40939 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHAP40939 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.03■□□□□ 0.96
HADHAP40939 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHAP40939 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHAP40939 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.03■□□□□ 0.96
HADHAP40939 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HADHAP40939 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HADHAP40939 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.03■□□□□ 0.96
HADHAP40939 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
HADHAP40939 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HADHAP40939 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.02■□□□□ 0.96
HADHAP40939 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.02■□□□□ 0.96
HADHAP40939 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 AC138907.5-202ENST00000569484 235 ntBASIC21.02■□□□□ 0.96
HADHAP40939 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.02■□□□□ 0.96
HADHAP40939 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.02■□□□□ 0.96
HADHAP40939 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.02■□□□□ 0.96
HADHAP40939 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHAP40939 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HADHAP40939 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HADHAP40939 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HADHAP40939 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.02■□□□□ 0.95
HADHAP40939 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.01■□□□□ 0.95
HADHAP40939 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.01■□□□□ 0.95
HADHAP40939 AC034268.1-201ENST00000441047 882 ntBASIC21.01■□□□□ 0.95
HADHAP40939 AC008175.2-201ENST00000612840 297 ntBASIC21.01■□□□□ 0.95
HADHAP40939 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.01■□□□□ 0.95
HADHAP40939 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.01■□□□□ 0.95
HADHAP40939 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HADHAP40939 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHAP40939 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21■□□□□ 0.95
HADHAP40939 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21■□□□□ 0.95
HADHAP40939 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21■□□□□ 0.95
HADHAP40939 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21■□□□□ 0.95
HADHAP40939 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21■□□□□ 0.95
HADHAP40939 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21■□□□□ 0.95
HADHAP40939 TESC-206ENST00000541210 936 ntTSL 3 BASIC21■□□□□ 0.95
HADHAP40939 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21■□□□□ 0.95
HADHAP40939 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21■□□□□ 0.95
HADHAP40939 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HADHAP40939 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HADHAP40939 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HADHAP40939 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HADHAP40939 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms