Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 MRM2YGL136C 963 nt3.69□□□□□ -1.82
TDP1P38319 NNF1YJR112W 606 nt3.69□□□□□ -1.82
TDP1P38319 MCM22YJR135C 720 nt3.69□□□□□ -1.82
TDP1P38319 MRPL20YKR085C 588 nt3.69□□□□□ -1.82
TDP1P38319 RPL13BYMR142C 600 nt3.69□□□□□ -1.82
TDP1P38319 PAI3YMR174C 207 nt3.69□□□□□ -1.82
TDP1P38319 YOR282WYOR282W 321 nt3.69□□□□□ -1.82
TDP1P38319 AIM4YBR194W 372 nt3.69□□□□□ -1.82
TDP1P38319 FUS2YMR232W 2034 nt3.69□□□□□ -1.82
TDP1P38319 MSL5YLR116W 1431 nt3.69□□□□□ -1.82
TDP1P38319 YRM1YOR172W 2361 nt3.68□□□□□ -1.82
TDP1P38319 YDR115WYDR115W 318 nt3.68□□□□□ -1.82
TDP1P38319 CGR1YGL029W 363 nt3.68□□□□□ -1.82
TDP1P38319 YAL004WYAL004W 648 nt3.68□□□□□ -1.82
TDP1P38319 YJL169WYJL169W 369 nt3.68□□□□□ -1.82
TDP1P38319 PIR1YKL164C 1026 nt3.68□□□□□ -1.82
TDP1P38319 AFB1YLR040C 675 nt3.68□□□□□ -1.82
TDP1P38319 RNH203YLR154C 333 nt3.68□□□□□ -1.82
TDP1P38319 CGI121YML036W 546 nt3.68□□□□□ -1.82
TDP1P38319 COQ5YML110C 924 nt3.68□□□□□ -1.82
TDP1P38319 YNL043CYNL043C 321 nt3.68□□□□□ -1.82
TDP1P38319 COQ10YOL008W 624 nt3.68□□□□□ -1.82
TDP1P38319 ROX1YPR065W 1107 nt3.68□□□□□ -1.82
TDP1P38319 FUN12YAL035W 3009 nt3.68□□□□□ -1.82
TDP1P38319 PEP7YDR323C 1548 nt3.68□□□□□ -1.82
TDP1P38319 IMD4YML056C 1575 nt3.68□□□□□ -1.82
TDP1P38319 NUP159YIL115C 4383 nt3.67□□□□□ -1.82
TDP1P38319 YDR526CYDR526C 471 nt3.67□□□□□ -1.82
TDP1P38319 NTF2YER009W 378 nt3.67□□□□□ -1.82
TDP1P38319 YFR010W-AYFR010W-A 189 nt3.67□□□□□ -1.82
TDP1P38319 YGR017WYGR017W 894 nt3.67□□□□□ -1.82
TDP1P38319 MAM33YIL070C 801 nt3.67□□□□□ -1.82
TDP1P38319 ABM1YJR108W 372 nt3.67□□□□□ -1.82
TDP1P38319 BET5YML077W 480 nt3.67□□□□□ -1.82
TDP1P38319 YMR141CYMR141C 309 nt3.67□□□□□ -1.82
TDP1P38319 YBR225WYBR225W 2703 nt3.67□□□□□ -1.82
TDP1P38319 STP1YDR463W 1560 nt3.67□□□□□ -1.82
TDP1P38319 AEP1YMR064W 1557 nt3.67□□□□□ -1.82
TDP1P38319 MIP6YHR015W 1980 nt3.67□□□□□ -1.82
TDP1P38319 GSC2YGR032W 5688 nt3.66□□□□□ -1.82
TDP1P38319 SEC53YFL045C 765 nt3.66□□□□□ -1.82
TDP1P38319 MTM1YGR257C 1101 nt3.66□□□□□ -1.82
TDP1P38319 GEP4YHR100C 558 nt3.66□□□□□ -1.82
TDP1P38319 DPH1YIL103W 1278 nt3.66□□□□□ -1.82
TDP1P38319 BSC3YLR465C 309 nt3.66□□□□□ -1.82
TDP1P38319 YOR203WYOR203W 354 nt3.66□□□□□ -1.82
TDP1P38319 PAM1YDR251W 2493 nt3.66□□□□□ -1.82
TDP1P38319 STU1YBL034C 4542 nt3.66□□□□□ -1.82
TDP1P38319 USA1YML029W 2517 nt3.66□□□□□ -1.82
TDP1P38319 EBS1YDR206W 2655 nt3.66□□□□□ -1.82
TDP1P38319 SMI1YGR229C 1518 nt3.65□□□□□ -1.82
TDP1P38319 LST4YKL176C 2487 nt3.65□□□□□ -1.82
TDP1P38319 EXO70YJL085W 1872 nt3.65□□□□□ -1.82
TDP1P38319 YDR149CYDR149C 708 nt3.65□□□□□ -1.83
TDP1P38319 SMB1YER029C 591 nt3.65□□□□□ -1.83
TDP1P38319 LIF1YGL090W 1266 nt3.65□□□□□ -1.83
TDP1P38319 VMA10YHR039C-A 345 nt3.65□□□□□ -1.83
TDP1P38319 YIR020C-BYIR020C-B 735 nt3.65□□□□□ -1.83
TDP1P38319 YMR031W-AYMR031W-A 327 nt3.65□□□□□ -1.83
TDP1P38319 RIO2YNL207W 1278 nt3.65□□□□□ -1.83
TDP1P38319 PDR17YNL264C 1053 nt3.65□□□□□ -1.83
TDP1P38319 YNL276CYNL276C 396 nt3.65□□□□□ -1.83
TDP1P38319 TPO5YKL174C 1857 nt3.64□□□□□ -1.83
TDP1P38319 RPN3YER021W 1572 nt3.64□□□□□ -1.83
TDP1P38319 DAL5YJR152W 1632 nt3.64□□□□□ -1.83
TDP1P38319 HMRA2YCR096C 360 nt3.64□□□□□ -1.83
TDP1P38319 FMP10YER182W 735 nt3.64□□□□□ -1.83
TDP1P38319 YKL118WYKL118W 312 nt3.64□□□□□ -1.83
TDP1P38319 PBA1YLR199C 831 nt3.64□□□□□ -1.83
TDP1P38319 PDP3YLR455W 915 nt3.64□□□□□ -1.83
TDP1P38319 YPL107WYPL107W 747 nt3.64□□□□□ -1.83
TDP1P38319 HAA1YPR008W 2085 nt3.64□□□□□ -1.83
TDP1P38319 APE2YKL157W 2859 nt3.64□□□□□ -1.83
TDP1P38319 PIN4YBL051C 2007 nt3.63□□□□□ -1.83
TDP1P38319 ERG5YMR015C 1617 nt3.63□□□□□ -1.83
TDP1P38319 ASI1YMR119W 1875 nt3.63□□□□□ -1.83
TDP1P38319 PPQ1YPL179W 1650 nt3.63□□□□□ -1.83
TDP1P38319 YDL071CYDL071C 375 nt3.63□□□□□ -1.83
TDP1P38319 AHA1YDR214W 1053 nt3.63□□□□□ -1.83
TDP1P38319 YGL039WYGL039W 1047 nt3.63□□□□□ -1.83
TDP1P38319 ERV1YGR029W 570 nt3.63□□□□□ -1.83
TDP1P38319 YHR032C-AYHR032C-A 120 nt3.63□□□□□ -1.83
TDP1P38319 OSH3YHR073W 2991 nt3.63□□□□□ -1.83
TDP1P38319 VPS63YLR261C 327 nt3.63□□□□□ -1.83
TDP1P38319 SHG1YBR258C 429 nt3.63□□□□□ -1.83
TDP1P38319 FRE4YNR060W 2160 nt3.63□□□□□ -1.83
TDP1P38319 HEF3YNL014W 3135 nt3.63□□□□□ -1.83
TDP1P38319 CDC55YGL190C 1581 nt3.63□□□□□ -1.83
TDP1P38319 EMC1YCL045C 2283 nt3.63□□□□□ -1.83
TDP1P38319 SWC4YGR002C 1431 nt3.62□□□□□ -1.83
TDP1P38319 ATG21YPL100W 1491 nt3.62□□□□□ -1.83
TDP1P38319 ALG8YOR067C 1734 nt3.62□□□□□ -1.83
TDP1P38319 snR8snR8 190 nt3.62□□□□□ -1.83
TDP1P38319 YGR051CYGR051C 324 nt3.62□□□□□ -1.83
TDP1P38319 POG1YIL122W 1056 nt3.62□□□□□ -1.83
TDP1P38319 YOL134CYOL134C 390 nt3.62□□□□□ -1.83
TDP1P38319 YOR331CYOR331C 558 nt3.62□□□□□ -1.83
TDP1P38319 YPR059CYPR059C 387 nt3.62□□□□□ -1.83
TDP1P38319 CAF130YGR134W 3369 nt3.62□□□□□ -1.83
TDP1P38319 SLM2YNL047C 1971 nt3.62□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 35.7 ms