Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDE6BP35913 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PDE6BP35913 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PDE6BP35913 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDE6BP35913 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PDE6BP35913 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDE6BP35913 AC007322.3-201ENST00000426526 701 ntBASIC25.91■■□□□ 1.74
PDE6BP35913 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PDE6BP35913 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PDE6BP35913 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PDE6BP35913 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.91■■□□□ 1.74
PDE6BP35913 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.91■■□□□ 1.74
PDE6BP35913 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.91■■□□□ 1.74
PDE6BP35913 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.9■■□□□ 1.74
PDE6BP35913 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.9■■□□□ 1.74
PDE6BP35913 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.9■■□□□ 1.74
PDE6BP35913 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.9■■□□□ 1.74
PDE6BP35913 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.9■■□□□ 1.74
PDE6BP35913 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.9■■□□□ 1.74
PDE6BP35913 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.9■■□□□ 1.74
PDE6BP35913 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDE6BP35913 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PDE6BP35913 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PDE6BP35913 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
PDE6BP35913 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.89■■□□□ 1.73
PDE6BP35913 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.89■■□□□ 1.73
PDE6BP35913 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PDE6BP35913 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.88■■□□□ 1.73
PDE6BP35913 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
PDE6BP35913 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
PDE6BP35913 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PDE6BP35913 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
PDE6BP35913 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.88■■□□□ 1.73
PDE6BP35913 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.88■■□□□ 1.73
PDE6BP35913 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.88■■□□□ 1.73
PDE6BP35913 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
PDE6BP35913 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PDE6BP35913 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PDE6BP35913 AC092053.2-201ENST00000640557 1818 ntBASIC25.87■■□□□ 1.73
PDE6BP35913 AC012618.2-201ENST00000428058 849 ntBASIC25.87■■□□□ 1.73
PDE6BP35913 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.87■■□□□ 1.73
PDE6BP35913 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.87■■□□□ 1.73
PDE6BP35913 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDE6BP35913 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDE6BP35913 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDE6BP35913 C11orf96-202ENST00000528572 1834 ntBASIC25.86■■□□□ 1.73
PDE6BP35913 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PDE6BP35913 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDE6BP35913 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.86■■□□□ 1.73
PDE6BP35913 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.86■■□□□ 1.73
PDE6BP35913 AC233702.5-201ENST00000584107 538 ntBASIC25.86■■□□□ 1.73
PDE6BP35913 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.86■■□□□ 1.73
PDE6BP35913 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.86■■□□□ 1.73
PDE6BP35913 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDE6BP35913 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PDE6BP35913 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE6BP35913 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.85■■□□□ 1.73
PDE6BP35913 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.85■■□□□ 1.73
PDE6BP35913 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE6BP35913 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.85■■□□□ 1.73
PDE6BP35913 BX088651.1-201ENST00000540551 451 ntBASIC25.85■■□□□ 1.73
PDE6BP35913 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.85■■□□□ 1.73
PDE6BP35913 AC010331.1-201ENST00000611423 582 ntBASIC25.85■■□□□ 1.73
PDE6BP35913 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE6BP35913 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDE6BP35913 CYP21A1P-202ENST00000354927 1481 ntBASIC25.85■■□□□ 1.73
PDE6BP35913 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PDE6BP35913 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE6BP35913 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.84■■□□□ 1.73
PDE6BP35913 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PDE6BP35913 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PDE6BP35913 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.84■■□□□ 1.73
PDE6BP35913 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE6BP35913 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE6BP35913 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE6BP35913 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
PDE6BP35913 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE6BP35913 RPS2P55-201ENST00000397318 883 ntBASIC25.84■■□□□ 1.73
PDE6BP35913 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE6BP35913 AC107956.1-201ENST00000494359 873 ntBASIC25.84■■□□□ 1.73
PDE6BP35913 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.84■■□□□ 1.73
PDE6BP35913 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PDE6BP35913 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDE6BP35913 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms