Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 RPL27AYHR010W 411 nt3.1□□□□□ -1.91
SHP1P34223 DSE2YHR143W 978 nt3.1□□□□□ -1.91
SHP1P34223 PEX18YHR160C 852 nt3.1□□□□□ -1.91
SHP1P34223 SDH3YKL141W 597 nt3.1□□□□□ -1.91
SHP1P34223 ECM9YKR004C 1134 nt3.1□□□□□ -1.91
SHP1P34223 RPS28BYLR264W 204 nt3.1□□□□□ -1.91
SHP1P34223 GIM3YNL153C 390 nt3.1□□□□□ -1.91
SHP1P34223 YNL184CYNL184C 327 nt3.1□□□□□ -1.91
SHP1P34223 MPD2YOL088C 834 nt3.1□□□□□ -1.91
SHP1P34223 GRE2YOL151W 1029 nt3.1□□□□□ -1.91
SHP1P34223 LOA1YPR139C 903 nt3.1□□□□□ -1.91
SHP1P34223 DOA4YDR069C 2781 nt3.1□□□□□ -1.91
SHP1P34223 ANR2YKL047W 1551 nt3.09□□□□□ -1.91
SHP1P34223 PWP2YCR057C 2772 nt3.09□□□□□ -1.91
SHP1P34223 HLR1YDR528W 1272 nt3.09□□□□□ -1.91
SHP1P34223 CKA1YIL035C 1119 nt3.09□□□□□ -1.91
SHP1P34223 VMA6YLR447C 1038 nt3.09□□□□□ -1.91
SHP1P34223 YBL108WYBL108W 306 nt3.09□□□□□ -1.91
SHP1P34223 YRO2YBR054W 1035 nt3.09□□□□□ -1.91
SHP1P34223 SUS1YBR111W-A 291 nt3.09□□□□□ -1.91
SHP1P34223 MUD1YBR119W 897 nt3.09□□□□□ -1.91
SHP1P34223 CHS3YBR023C 3498 nt3.09□□□□□ -1.91
SHP1P34223 ERG9YHR190W 1335 nt3.09□□□□□ -1.91
SHP1P34223 ETP1YHL010C 1758 nt3.09□□□□□ -1.91
SHP1P34223 TCP1YDR212W 1680 nt3.08□□□□□ -1.92
SHP1P34223 SRD1YCR018C 666 nt3.08□□□□□ -1.92
SHP1P34223 YDL050CYDL050C 372 nt3.08□□□□□ -1.92
SHP1P34223 YIL046W-AYIL046W-A 165 nt3.08□□□□□ -1.92
SHP1P34223 YOL029CYOL029C 606 nt3.08□□□□□ -1.92
SHP1P34223 PEX11YOL147C 711 nt3.08□□□□□ -1.92
SHP1P34223 YPR077CYPR077C 372 nt3.08□□□□□ -1.92
SHP1P34223 MUB1YMR100W 1863 nt3.07□□□□□ -1.92
SHP1P34223 ROM1YGR070W 3468 nt3.07□□□□□ -1.92
SHP1P34223 APC11YDL008W 498 nt3.07□□□□□ -1.92
SHP1P34223 LIF1YGL090W 1266 nt3.07□□□□□ -1.92
SHP1P34223 SAE2YGL175C 1038 nt3.07□□□□□ -1.92
SHP1P34223 COG2YGR120C 789 nt3.07□□□□□ -1.92
SHP1P34223 IRC21YMR073C 606 nt3.07□□□□□ -1.92
SHP1P34223 YAP7YOL028C 738 nt3.07□□□□□ -1.92
SHP1P34223 YCT1YLL055W 1596 nt3.07□□□□□ -1.92
SHP1P34223 PEX5YDR244W 1839 nt3.07□□□□□ -1.92
SHP1P34223 RED1YLR263W 2484 nt3.07□□□□□ -1.92
SHP1P34223 YDL163WYDL163W 303 nt3.06□□□□□ -1.92
SHP1P34223 OCA6YDR067C 675 nt3.06□□□□□ -1.92
SHP1P34223 SEC15YGL233W 2733 nt3.06□□□□□ -1.92
SHP1P34223 THG1YGR024C 714 nt3.06□□□□□ -1.92
SHP1P34223 DLS1YJL065C 504 nt3.06□□□□□ -1.92
SHP1P34223 YET1YKL065C 621 nt3.06□□□□□ -1.92
SHP1P34223 ECI1YLR284C 843 nt3.06□□□□□ -1.92
SHP1P34223 AVT5YBL089W 1380 nt3.06□□□□□ -1.92
SHP1P34223 RSM19YNR037C 276 nt3.06□□□□□ -1.92
SHP1P34223 RPL36BYPL249C-A 303 nt3.06□□□□□ -1.92
SHP1P34223 RPN1YHR027C 2982 nt3.06□□□□□ -1.92
SHP1P34223 LST4YKL176C 2487 nt3.05□□□□□ -1.92
SHP1P34223 PBP4YDL053C 558 nt3.05□□□□□ -1.92
SHP1P34223 YDR262WYDR262W 819 nt3.05□□□□□ -1.92
SHP1P34223 TMA20YER007C-A 546 nt3.05□□□□□ -1.92
SHP1P34223 RTT105YER104W 627 nt3.05□□□□□ -1.92
SHP1P34223 SFT1YKL006C-A 294 nt3.05□□□□□ -1.92
SHP1P34223 RPL17AYKL180W 555 nt3.05□□□□□ -1.92
SHP1P34223 PAU23YLR037C 375 nt3.05□□□□□ -1.92
SHP1P34223 YNL089CYNL089C 477 nt3.05□□□□□ -1.92
SHP1P34223 PDR17YNL264C 1053 nt3.05□□□□□ -1.92
SHP1P34223 MIX23YBL107C 591 nt3.05□□□□□ -1.92
SHP1P34223 TUM1YOR251C 915 nt3.05□□□□□ -1.92
SHP1P34223 SLK19YOR195W 2466 nt3.05□□□□□ -1.92
SHP1P34223 SKN7YHR206W 1869 nt3.05□□□□□ -1.92
SHP1P34223 CIK1YMR198W 1785 nt3.05□□□□□ -1.92
SHP1P34223 VBA4YDR119W 2307 nt3.04□□□□□ -1.92
SHP1P34223 BRE5YNR051C 1548 nt3.04□□□□□ -1.92
SHP1P34223 MPS1YDL028C 2295 nt3.04□□□□□ -1.92
SHP1P34223 AYT1YLL063C 1425 nt3.04□□□□□ -1.92
SHP1P34223 UBX3YDL091C 1368 nt3.04□□□□□ -1.92
SHP1P34223 MGT1YDL200C 567 nt3.04□□□□□ -1.92
SHP1P34223 NTF2YER009W 378 nt3.04□□□□□ -1.92
SHP1P34223 YFR054CYFR054C 579 nt3.04□□□□□ -1.92
SHP1P34223 EMC4YGL231C 573 nt3.04□□□□□ -1.92
SHP1P34223 MVB12YGR206W 306 nt3.04□□□□□ -1.92
SHP1P34223 EFG1YGR271C-A 702 nt3.04□□□□□ -1.92
SHP1P34223 RPL13BYMR142C 600 nt3.04□□□□□ -1.92
SHP1P34223 PAI3YMR174C 207 nt3.04□□□□□ -1.92
SHP1P34223 DYN3YMR299C 939 nt3.04□□□□□ -1.92
SHP1P34223 HHF2YNL030W 312 nt3.04□□□□□ -1.92
SHP1P34223 RHO5YNL180C 996 nt3.04□□□□□ -1.92
SHP1P34223 CUR1YPR158W 759 nt3.04□□□□□ -1.92
SHP1P34223 snR43snR43 209 nt3.04□□□□□ -1.92
SHP1P34223 YBR259WYBR259W 2067 nt3.04□□□□□ -1.92
SHP1P34223 MUS81YDR386W 1899 nt3.03□□□□□ -1.92
SHP1P34223 NSA1YGL111W 1392 nt3.03□□□□□ -1.92
SHP1P34223 NOP12YOL041C 1380 nt3.03□□□□□ -1.92
SHP1P34223 PHO81YGR233C 3537 nt3.03□□□□□ -1.92
SHP1P34223 snR5snR5 204 nt3.03□□□□□ -1.92
SHP1P34223 CPR5YDR304C 678 nt3.03□□□□□ -1.92
SHP1P34223 YDR461C-AYDR461C-A 243 nt3.03□□□□□ -1.92
SHP1P34223 RPB9YGL070C 369 nt3.03□□□□□ -1.92
SHP1P34223 BUD19YJL188C 309 nt3.03□□□□□ -1.92
SHP1P34223 YJR087WYJR087W 351 nt3.03□□□□□ -1.92
SHP1P34223 JIP3YLR331C 378 nt3.03□□□□□ -1.92
SHP1P34223 YMR254CYMR254C 309 nt3.03□□□□□ -1.92
SHP1P34223 YBL065WYBL065W 345 nt3.03□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 41.8 ms