Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.94■□□□□ 0.94
LSP1P33241 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.93■□□□□ 0.94
LSP1P33241 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LSP1P33241 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.93■□□□□ 0.94
LSP1P33241 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.93■□□□□ 0.94
LSP1P33241 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.93■□□□□ 0.94
LSP1P33241 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.93■□□□□ 0.94
LSP1P33241 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.93■□□□□ 0.94
LSP1P33241 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSP1P33241 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSP1P33241 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.92■□□□□ 0.94
LSP1P33241 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSP1P33241 AC012354.3-201ENST00000623734 483 ntBASIC20.92■□□□□ 0.94
LSP1P33241 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSP1P33241 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.92■□□□□ 0.94
LSP1P33241 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LSP1P33241 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSP1P33241 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSP1P33241 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.92■□□□□ 0.94
LSP1P33241 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSP1P33241 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LSP1P33241 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LSP1P33241 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.92■□□□□ 0.94
LSP1P33241 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSP1P33241 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSP1P33241 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSP1P33241 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSP1P33241 KRT18P60-201ENST00000312876 1297 ntBASIC20.91■□□□□ 0.94
LSP1P33241 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSP1P33241 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSP1P33241 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.91■□□□□ 0.94
LSP1P33241 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSP1P33241 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.91■□□□□ 0.94
LSP1P33241 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSP1P33241 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.91■□□□□ 0.94
LSP1P33241 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LSP1P33241 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.91■□□□□ 0.94
LSP1P33241 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.9■□□□□ 0.94
LSP1P33241 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.9■□□□□ 0.94
LSP1P33241 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.9■□□□□ 0.94
LSP1P33241 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LSP1P33241 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LSP1P33241 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
LSP1P33241 AC026471.1-201ENST00000564629 3026 ntBASIC20.9■□□□□ 0.94
LSP1P33241 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.9■□□□□ 0.94
LSP1P33241 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSP1P33241 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
LSP1P33241 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LSP1P33241 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.89■□□□□ 0.93
LSP1P33241 AL499627.2-201ENST00000606283 725 ntBASIC20.89■□□□□ 0.93
LSP1P33241 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LSP1P33241 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.89■□□□□ 0.93
LSP1P33241 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSP1P33241 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSP1P33241 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.88■□□□□ 0.93
LSP1P33241 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSP1P33241 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSP1P33241 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.88■□□□□ 0.93
LSP1P33241 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.88■□□□□ 0.93
LSP1P33241 AC139795.1-202ENST00000500444 432 ntBASIC20.88■□□□□ 0.93
LSP1P33241 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSP1P33241 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.88■□□□□ 0.93
LSP1P33241 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
LSP1P33241 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.87■□□□□ 0.93
LSP1P33241 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LSP1P33241 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSP1P33241 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms