Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.93■□□□□ 0.78
HTR1EP28566 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
HTR1EP28566 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.93■□□□□ 0.78
HTR1EP28566 OR2I1P-207ENST00000453522 948 ntBASIC19.93■□□□□ 0.78
HTR1EP28566 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
HTR1EP28566 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HTR1EP28566 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.93■□□□□ 0.78
HTR1EP28566 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 AP005212.1-201ENST00000581547 1997 ntBASIC19.93■□□□□ 0.78
HTR1EP28566 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HTR1EP28566 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
HTR1EP28566 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTR1EP28566 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.92■□□□□ 0.78
HTR1EP28566 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTR1EP28566 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.92■□□□□ 0.78
HTR1EP28566 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HTR1EP28566 AC123595.1-201ENST00000440769 1046 ntBASIC19.92■□□□□ 0.78
HTR1EP28566 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.92■□□□□ 0.78
HTR1EP28566 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.92■□□□□ 0.78
HTR1EP28566 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTR1EP28566 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.92■□□□□ 0.78
HTR1EP28566 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
HTR1EP28566 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTR1EP28566 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTR1EP28566 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.91■□□□□ 0.78
HTR1EP28566 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HTR1EP28566 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.91■□□□□ 0.78
HTR1EP28566 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HTR1EP28566 AC006128.1-201ENST00000624704 1661 ntBASIC19.91■□□□□ 0.78
HTR1EP28566 AC027612.3-201ENST00000413684 1047 ntBASIC19.91■□□□□ 0.78
HTR1EP28566 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HTR1EP28566 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.91■□□□□ 0.78
HTR1EP28566 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.91■□□□□ 0.78
HTR1EP28566 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.91■□□□□ 0.78
HTR1EP28566 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.91■□□□□ 0.78
HTR1EP28566 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
HTR1EP28566 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTR1EP28566 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HTR1EP28566 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
HTR1EP28566 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTR1EP28566 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.9■□□□□ 0.78
HTR1EP28566 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTR1EP28566 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.9■□□□□ 0.78
HTR1EP28566 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HTR1EP28566 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.9■□□□□ 0.78
HTR1EP28566 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.9■□□□□ 0.78
HTR1EP28566 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HTR1EP28566 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HTR1EP28566 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.9■□□□□ 0.78
HTR1EP28566 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.9■□□□□ 0.78
HTR1EP28566 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTR1EP28566 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTR1EP28566 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTR1EP28566 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HTR1EP28566 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.89■□□□□ 0.77
HTR1EP28566 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTR1EP28566 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTR1EP28566 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTR1EP28566 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTR1EP28566 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTR1EP28566 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTR1EP28566 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HTR1EP28566 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HTR1EP28566 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HTR1EP28566 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.88■□□□□ 0.77
HTR1EP28566 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
HTR1EP28566 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.88■□□□□ 0.77
HTR1EP28566 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTR1EP28566 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HTR1EP28566 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTR1EP28566 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HTR1EP28566 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HTR1EP28566 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HTR1EP28566 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTR1EP28566 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.88■□□□□ 0.77
HTR1EP28566 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HTR1EP28566 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
HTR1EP28566 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HTR1EP28566 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.88■□□□□ 0.77
HTR1EP28566 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTR1EP28566 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HTR1EP28566 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms