Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.69■■□□□ 1.22
RFX1P22670 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX1P22670 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.69■■□□□ 1.22
RFX1P22670 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RFX1P22670 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX1P22670 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.69■■□□□ 1.22
RFX1P22670 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.69■■□□□ 1.22
RFX1P22670 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.69■■□□□ 1.22
RFX1P22670 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RFX1P22670 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.69■■□□□ 1.22
RFX1P22670 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.69■■□□□ 1.22
RFX1P22670 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.69■■□□□ 1.22
RFX1P22670 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX1P22670 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RFX1P22670 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RFX1P22670 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFX1P22670 AC004854.2-201ENST00000608450 1441 ntBASIC22.68■■□□□ 1.22
RFX1P22670 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.68■■□□□ 1.22
RFX1P22670 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RFX1P22670 GPX1P1-201ENST00000388829 606 ntBASIC22.68■■□□□ 1.22
RFX1P22670 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RFX1P22670 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.68■■□□□ 1.22
RFX1P22670 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RFX1P22670 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.67■■□□□ 1.22
RFX1P22670 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
RFX1P22670 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RFX1P22670 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.67■■□□□ 1.22
RFX1P22670 CROCCP5-201ENST00000436658 830 ntBASIC22.67■■□□□ 1.22
RFX1P22670 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.67■■□□□ 1.22
RFX1P22670 KRT18P61-201ENST00000585825 1298 ntBASIC22.67■■□□□ 1.22
RFX1P22670 TPRG1LP1-201ENST00000598702 760 ntBASIC22.67■■□□□ 1.22
RFX1P22670 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX1P22670 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX1P22670 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFX1P22670 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFX1P22670 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX1P22670 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RFX1P22670 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.66■■□□□ 1.22
RFX1P22670 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX1P22670 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFX1P22670 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.66■■□□□ 1.22
RFX1P22670 KRT18P11-201ENST00000435214 1283 ntBASIC22.66■■□□□ 1.22
RFX1P22670 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX1P22670 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.66■■□□□ 1.22
RFX1P22670 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFX1P22670 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFX1P22670 PKD1P6-201ENST00000343738 4769 ntBASIC22.66■■□□□ 1.22
RFX1P22670 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RFX1P22670 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RFX1P22670 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX1P22670 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX1P22670 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX1P22670 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX1P22670 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RFX1P22670 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX1P22670 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RFX1P22670 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.65■■□□□ 1.22
RFX1P22670 NCF1B-203ENST00000435988 1254 ntBASIC22.65■■□□□ 1.22
RFX1P22670 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX1P22670 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX1P22670 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX1P22670 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX1P22670 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX1P22670 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFX1P22670 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.65■■□□□ 1.22
RFX1P22670 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.64■■□□□ 1.22
RFX1P22670 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
RFX1P22670 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RFX1P22670 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.64■■□□□ 1.21
RFX1P22670 AC011767.1-201ENST00000617410 1153 ntBASIC22.64■■□□□ 1.21
RFX1P22670 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.64■■□□□ 1.21
RFX1P22670 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RFX1P22670 AP004607.4-201ENST00000530158 1459 ntBASIC22.64■■□□□ 1.21
RFX1P22670 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RFX1P22670 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.64■■□□□ 1.21
RFX1P22670 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFX1P22670 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.63■■□□□ 1.21
RFX1P22670 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFX1P22670 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.63■■□□□ 1.21
RFX1P22670 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFX1P22670 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RFX1P22670 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.63■■□□□ 1.21
RFX1P22670 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.63■■□□□ 1.21
RFX1P22670 EEF1DP3-203ENST00000566025 782 ntBASIC22.63■■□□□ 1.21
RFX1P22670 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.63■■□□□ 1.21
RFX1P22670 AC066615.1-201ENST00000640911 628 ntBASIC22.63■■□□□ 1.21
RFX1P22670 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFX1P22670 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFX1P22670 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.63■■□□□ 1.21
RFX1P22670 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RFX1P22670 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
RFX1P22670 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.62■■□□□ 1.21
RFX1P22670 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RFX1P22670 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.62■■□□□ 1.21
RFX1P22670 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.62■■□□□ 1.21
RFX1P22670 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.62■■□□□ 1.21
RFX1P22670 AC053503.5-201ENST00000601508 636 ntBASIC22.62■■□□□ 1.21
RFX1P22670 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RFX1P22670 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RFX1P22670 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms