Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPN3P20807 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN3P20807 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN3P20807 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN3P20807 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN3P20807 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN3P20807 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN3P20807 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN3P20807 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CAPN3P20807 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.02■□□□□ 0.8
CAPN3P20807 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.02■□□□□ 0.8
CAPN3P20807 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN3P20807 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CAPN3P20807 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN3P20807 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN3P20807 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN3P20807 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CAPN3P20807 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CAPN3P20807 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN3P20807 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN3P20807 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN3P20807 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.01■□□□□ 0.79
CAPN3P20807 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN3P20807 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.01■□□□□ 0.79
CAPN3P20807 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CAPN3P20807 AC011298.3-201ENST00000615796 283 ntBASIC20.01■□□□□ 0.79
CAPN3P20807 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN3P20807 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.01■□□□□ 0.79
CAPN3P20807 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN3P20807 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN3P20807 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CAPN3P20807 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CAPN3P20807 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN3P20807 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CAPN3P20807 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.01■□□□□ 0.79
CAPN3P20807 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.01■□□□□ 0.79
CAPN3P20807 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20■□□□□ 0.79
CAPN3P20807 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20■□□□□ 0.79
CAPN3P20807 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CAPN3P20807 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CAPN3P20807 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20■□□□□ 0.79
CAPN3P20807 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20■□□□□ 0.79
CAPN3P20807 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20■□□□□ 0.79
CAPN3P20807 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20■□□□□ 0.79
CAPN3P20807 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20■□□□□ 0.79
CAPN3P20807 AC027702.1-201ENST00000563810 1770 ntBASIC20■□□□□ 0.79
CAPN3P20807 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPN3P20807 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN3P20807 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CAPN3P20807 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPN3P20807 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPN3P20807 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPN3P20807 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN3P20807 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN3P20807 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CAPN3P20807 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CAPN3P20807 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.99■□□□□ 0.79
CAPN3P20807 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.99■□□□□ 0.79
CAPN3P20807 MIR4767-201ENST00000582827 78 ntBASIC19.99■□□□□ 0.79
CAPN3P20807 SMUG1P1-201ENST00000590640 811 ntBASIC19.99■□□□□ 0.79
CAPN3P20807 AL137784.2-201ENST00000607332 1000 ntBASIC19.99■□□□□ 0.79
CAPN3P20807 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CAPN3P20807 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.98■□□□□ 0.79
CAPN3P20807 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.98■□□□□ 0.79
CAPN3P20807 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CAPN3P20807 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.98■□□□□ 0.79
CAPN3P20807 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CAPN3P20807 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CAPN3P20807 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN3P20807 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN3P20807 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN3P20807 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN3P20807 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CAPN3P20807 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CAPN3P20807 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.97■□□□□ 0.79
CAPN3P20807 PCDHAC2-203ENST00000615316 3011 ntBASIC19.97■□□□□ 0.79
CAPN3P20807 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.97■□□□□ 0.79
CAPN3P20807 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms