Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS1P17812 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS1P17812 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CTPS1P17812 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS1P17812 SLC7A5P1-201ENST00000568957 537 ntBASIC20.98■□□□□ 0.95
CTPS1P17812 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.98■□□□□ 0.95
CTPS1P17812 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS1P17812 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CTPS1P17812 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.98■□□□□ 0.95
CTPS1P17812 AC010536.3-201ENST00000620306 533 ntBASIC20.98■□□□□ 0.95
CTPS1P17812 AF106564.1-201ENST00000607058 2553 ntBASIC20.98■□□□□ 0.95
CTPS1P17812 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS1P17812 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS1P17812 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS1P17812 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTPS1P17812 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.97■□□□□ 0.95
CTPS1P17812 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
CTPS1P17812 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CTPS1P17812 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.97■□□□□ 0.95
CTPS1P17812 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.97■□□□□ 0.95
CTPS1P17812 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.97■□□□□ 0.95
CTPS1P17812 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.97■□□□□ 0.95
CTPS1P17812 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CTPS1P17812 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.97■□□□□ 0.95
CTPS1P17812 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CTPS1P17812 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTPS1P17812 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.97■□□□□ 0.95
CTPS1P17812 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CTPS1P17812 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.96■□□□□ 0.95
CTPS1P17812 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CTPS1P17812 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTPS1P17812 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTPS1P17812 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.96■□□□□ 0.95
CTPS1P17812 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.96■□□□□ 0.95
CTPS1P17812 DUX4L16-201ENST00000555130 1264 ntBASIC20.96■□□□□ 0.95
CTPS1P17812 AC073111.5-205ENST00000641717 521 ntBASIC20.96■□□□□ 0.95
CTPS1P17812 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CTPS1P17812 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTPS1P17812 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.96■□□□□ 0.95
CTPS1P17812 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTPS1P17812 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.96■□□□□ 0.95
CTPS1P17812 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS1P17812 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CTPS1P17812 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS1P17812 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CTPS1P17812 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.95■□□□□ 0.94
CTPS1P17812 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.95■□□□□ 0.94
CTPS1P17812 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CTPS1P17812 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS1P17812 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CTPS1P17812 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.95■□□□□ 0.94
CTPS1P17812 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.95■□□□□ 0.94
CTPS1P17812 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.95■□□□□ 0.94
CTPS1P17812 FEM1AP4-201ENST00000443167 1987 ntBASIC20.95■□□□□ 0.94
CTPS1P17812 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS1P17812 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS1P17812 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS1P17812 RBM17P2-201ENST00000616397 1405 ntBASIC20.95■□□□□ 0.94
CTPS1P17812 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTPS1P17812 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CTPS1P17812 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
CTPS1P17812 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CTPS1P17812 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS1P17812 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CTPS1P17812 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.94■□□□□ 0.94
CTPS1P17812 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.94■□□□□ 0.94
CTPS1P17812 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS1P17812 TERF1P5-201ENST00000477545 1207 ntBASIC20.94■□□□□ 0.94
CTPS1P17812 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.94■□□□□ 0.94
CTPS1P17812 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
CTPS1P17812 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.94■□□□□ 0.94
CTPS1P17812 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CTPS1P17812 RARRES2P11-201ENST00000635158 484 ntBASIC20.94■□□□□ 0.94
CTPS1P17812 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.94■□□□□ 0.94
CTPS1P17812 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTPS1P17812 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS1P17812 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CTPS1P17812 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS1P17812 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS1P17812 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.93■□□□□ 0.94
CTPS1P17812 CDCA4P2-201ENST00000441182 718 ntBASIC20.93■□□□□ 0.94
CTPS1P17812 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CTPS1P17812 AC245052.3-201ENST00000450182 901 ntBASIC20.93■□□□□ 0.94
CTPS1P17812 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.93■□□□□ 0.94
CTPS1P17812 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.93■□□□□ 0.94
CTPS1P17812 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS1P17812 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS1P17812 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTPS1P17812 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.92■□□□□ 0.94
CTPS1P17812 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTPS1P17812 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CTPS1P17812 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms