Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.22■□□□□ 0.67
PRKCAP17252 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.22■□□□□ 0.67
PRKCAP17252 RARRES2P6-201ENST00000567333 442 ntBASIC19.22■□□□□ 0.67
PRKCAP17252 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.22■□□□□ 0.67
PRKCAP17252 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.22■□□□□ 0.67
PRKCAP17252 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.22■□□□□ 0.67
PRKCAP17252 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PRKCAP17252 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRKCAP17252 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.21■□□□□ 0.67
PRKCAP17252 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.21■□□□□ 0.67
PRKCAP17252 AC026271.2-201ENST00000428091 497 ntBASIC19.21■□□□□ 0.67
PRKCAP17252 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 AC087623.3-201ENST00000607047 1098 ntBASIC19.21■□□□□ 0.67
PRKCAP17252 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.21■□□□□ 0.67
PRKCAP17252 AC026310.3-201ENST00000625186 2373 ntBASIC19.21■□□□□ 0.67
PRKCAP17252 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRKCAP17252 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PRKCAP17252 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PRKCAP17252 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.2■□□□□ 0.66
PRKCAP17252 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.2■□□□□ 0.66
PRKCAP17252 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.2■□□□□ 0.66
PRKCAP17252 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.2■□□□□ 0.66
PRKCAP17252 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.2■□□□□ 0.66
PRKCAP17252 DUX4L2-201ENST00000561772 1275 ntBASIC19.2■□□□□ 0.66
PRKCAP17252 EEF1DP3-203ENST00000566025 782 ntBASIC19.2■□□□□ 0.66
PRKCAP17252 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.2■□□□□ 0.66
PRKCAP17252 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
PRKCAP17252 DUX4L6-201ENST00000626483 1275 ntBASIC19.2■□□□□ 0.66
PRKCAP17252 DUX4L1-201ENST00000627662 1275 ntBASIC19.2■□□□□ 0.66
PRKCAP17252 DUX4L8-201ENST00000629013 1275 ntBASIC19.2■□□□□ 0.66
PRKCAP17252 DUX4L3-201ENST00000630187 1275 ntBASIC19.2■□□□□ 0.66
PRKCAP17252 DUX4L7-201ENST00000630678 1275 ntBASIC19.2■□□□□ 0.66
PRKCAP17252 DUX4L5-201ENST00000630834 1275 ntBASIC19.2■□□□□ 0.66
PRKCAP17252 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.2■□□□□ 0.66
PRKCAP17252 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.2■□□□□ 0.66
PRKCAP17252 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRKCAP17252 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.19■□□□□ 0.66
PRKCAP17252 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PRKCAP17252 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.19■□□□□ 0.66
PRKCAP17252 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.19■□□□□ 0.66
PRKCAP17252 AC053503.5-201ENST00000601508 636 ntBASIC19.19■□□□□ 0.66
PRKCAP17252 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRKCAP17252 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.19■□□□□ 0.66
PRKCAP17252 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRKCAP17252 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.19■□□□□ 0.66
PRKCAP17252 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PRKCAP17252 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRKCAP17252 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.18■□□□□ 0.66
PRKCAP17252 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.18■□□□□ 0.66
PRKCAP17252 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PRKCAP17252 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.18■□□□□ 0.66
PRKCAP17252 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRKCAP17252 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.18■□□□□ 0.66
PRKCAP17252 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PRKCAP17252 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PRKCAP17252 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.18■□□□□ 0.66
PRKCAP17252 AC034268.1-201ENST00000441047 882 ntBASIC19.18■□□□□ 0.66
PRKCAP17252 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.18■□□□□ 0.66
PRKCAP17252 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRKCAP17252 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms