Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SP9P0CG40 ANOS2P-203ENST00000472227 1816 ntBASIC20.81■□□□□ 0.92
SP9P0CG40 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SP9P0CG40 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SP9P0CG40 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SP9P0CG40 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SP9P0CG40 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.81■□□□□ 0.92
SP9P0CG40 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.81■□□□□ 0.92
SP9P0CG40 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.81■□□□□ 0.92
SP9P0CG40 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SP9P0CG40 AL049597.2-201ENST00000565575 961 ntBASIC20.81■□□□□ 0.92
SP9P0CG40 AL590326.2-201ENST00000625139 305 ntBASIC20.81■□□□□ 0.92
SP9P0CG40 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SP9P0CG40 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SP9P0CG40 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.8■□□□□ 0.92
SP9P0CG40 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.8■□□□□ 0.92
SP9P0CG40 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.8■□□□□ 0.92
SP9P0CG40 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SP9P0CG40 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.8■□□□□ 0.92
SP9P0CG40 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SP9P0CG40 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.8■□□□□ 0.92
SP9P0CG40 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.8■□□□□ 0.92
SP9P0CG40 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.8■□□□□ 0.92
SP9P0CG40 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.8■□□□□ 0.92
SP9P0CG40 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.8■□□□□ 0.92
SP9P0CG40 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.8■□□□□ 0.92
SP9P0CG40 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SP9P0CG40 AL353708.3-201ENST00000610272 989 ntBASIC20.8■□□□□ 0.92
SP9P0CG40 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.8■□□□□ 0.92
SP9P0CG40 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SP9P0CG40 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
SP9P0CG40 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.79■□□□□ 0.92
SP9P0CG40 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SP9P0CG40 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SP9P0CG40 AC092068.2-201ENST00000590491 1708 ntBASIC20.79■□□□□ 0.92
SP9P0CG40 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SP9P0CG40 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SP9P0CG40 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SP9P0CG40 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SP9P0CG40 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.79■□□□□ 0.92
SP9P0CG40 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SP9P0CG40 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SP9P0CG40 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.79■□□□□ 0.92
SP9P0CG40 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SP9P0CG40 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.79■□□□□ 0.92
SP9P0CG40 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.78■□□□□ 0.92
SP9P0CG40 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SP9P0CG40 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SP9P0CG40 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SP9P0CG40 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.78■□□□□ 0.92
SP9P0CG40 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SP9P0CG40 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.78■□□□□ 0.92
SP9P0CG40 KRASP1-201ENST00000407852 552 ntBASIC20.78■□□□□ 0.92
SP9P0CG40 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
SP9P0CG40 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.78■□□□□ 0.92
SP9P0CG40 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.78■□□□□ 0.92
SP9P0CG40 RARRES2P10-201ENST00000564312 460 ntBASIC20.78■□□□□ 0.92
SP9P0CG40 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.78■□□□□ 0.92
SP9P0CG40 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SP9P0CG40 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SP9P0CG40 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SP9P0CG40 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SP9P0CG40 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SP9P0CG40 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SP9P0CG40 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SP9P0CG40 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.77■□□□□ 0.92
SP9P0CG40 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.77■□□□□ 0.92
SP9P0CG40 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.77■□□□□ 0.92
SP9P0CG40 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
SP9P0CG40 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SP9P0CG40 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SP9P0CG40 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SP9P0CG40 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SP9P0CG40 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SP9P0CG40 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.76■□□□□ 0.91
SP9P0CG40 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SP9P0CG40 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SP9P0CG40 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.76■□□□□ 0.91
SP9P0CG40 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.76■□□□□ 0.91
SP9P0CG40 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms