Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.17■□□□□ 0.66
THBS1P07996 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.17■□□□□ 0.66
THBS1P07996 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS1P07996 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
THBS1P07996 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.16■□□□□ 0.66
THBS1P07996 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.16■□□□□ 0.66
THBS1P07996 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.16■□□□□ 0.66
THBS1P07996 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 AC123595.1-201ENST00000440769 1046 ntBASIC19.16■□□□□ 0.66
THBS1P07996 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.16■□□□□ 0.66
THBS1P07996 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.16■□□□□ 0.66
THBS1P07996 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.16■□□□□ 0.66
THBS1P07996 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.16■□□□□ 0.66
THBS1P07996 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THBS1P07996 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.16■□□□□ 0.66
THBS1P07996 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.15■□□□□ 0.66
THBS1P07996 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
THBS1P07996 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.15■□□□□ 0.66
THBS1P07996 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
THBS1P07996 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.15■□□□□ 0.66
THBS1P07996 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
THBS1P07996 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.15■□□□□ 0.66
THBS1P07996 AL162430.1-201ENST00000480705 870 ntBASIC19.15■□□□□ 0.66
THBS1P07996 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.15■□□□□ 0.66
THBS1P07996 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.15■□□□□ 0.66
THBS1P07996 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.15■□□□□ 0.66
THBS1P07996 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
THBS1P07996 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
THBS1P07996 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.15■□□□□ 0.66
THBS1P07996 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 LINC01521-201ENST00000504184 1943 ntBASIC19.15■□□□□ 0.66
THBS1P07996 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.15■□□□□ 0.66
THBS1P07996 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THBS1P07996 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
THBS1P07996 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
THBS1P07996 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
THBS1P07996 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
THBS1P07996 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
THBS1P07996 KRT16P2-201ENST00000414673 1423 ntBASIC19.14■□□□□ 0.65
THBS1P07996 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
THBS1P07996 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
THBS1P07996 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
THBS1P07996 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
THBS1P07996 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
THBS1P07996 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.13■□□□□ 0.65
THBS1P07996 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.13■□□□□ 0.65
THBS1P07996 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
THBS1P07996 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.13■□□□□ 0.65
THBS1P07996 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.13■□□□□ 0.65
THBS1P07996 AC010141.2-201ENST00000452426 721 ntBASIC19.13■□□□□ 0.65
THBS1P07996 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.13■□□□□ 0.65
THBS1P07996 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.13■□□□□ 0.65
THBS1P07996 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
THBS1P07996 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.13■□□□□ 0.65
THBS1P07996 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
THBS1P07996 FEM1AP1-201ENST00000431297 1995 ntBASIC19.13■□□□□ 0.65
THBS1P07996 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.13■□□□□ 0.65
THBS1P07996 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.13■□□□□ 0.65
THBS1P07996 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
THBS1P07996 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
THBS1P07996 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
THBS1P07996 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms