Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 RARRES2P11-201ENST00000635158 484 ntBASIC21.18■□□□□ 0.98
HLA-DQB2P05538 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQB2P05538 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQB2P05538 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQB2P05538 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQB2P05538 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQB2P05538 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HLA-DQB2P05538 AC137761.2-201ENST00000561729 223 ntBASIC21.16■□□□□ 0.98
HLA-DQB2P05538 AC145350.3-201ENST00000569033 163 ntBASIC21.16■□□□□ 0.98
HLA-DQB2P05538 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.16■□□□□ 0.98
HLA-DQB2P05538 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.16■□□□□ 0.98
HLA-DQB2P05538 MYCNOS-205ENST00000641950 531 ntBASIC21.16■□□□□ 0.98
HLA-DQB2P05538 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQB2P05538 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.15■□□□□ 0.98
HLA-DQB2P05538 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DQB2P05538 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DQB2P05538 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DQB2P05538 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.14■□□□□ 0.97
HLA-DQB2P05538 AC245052.3-201ENST00000450182 901 ntBASIC21.14■□□□□ 0.97
HLA-DQB2P05538 SLC7A5P1-201ENST00000568957 537 ntBASIC21.14■□□□□ 0.97
HLA-DQB2P05538 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQB2P05538 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.14■□□□□ 0.97
HLA-DQB2P05538 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.14■□□□□ 0.97
HLA-DQB2P05538 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQB2P05538 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQB2P05538 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.13■□□□□ 0.97
HLA-DQB2P05538 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQB2P05538 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.12■□□□□ 0.97
HLA-DQB2P05538 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms