Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD74P04233 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.52■□□□□ 0.4
CD74P04233 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD74P04233 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD74P04233 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CD74P04233 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD74P04233 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD74P04233 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CD74P04233 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.52■□□□□ 0.4
CD74P04233 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.52■□□□□ 0.4
CD74P04233 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.52■□□□□ 0.4
CD74P04233 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD74P04233 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD74P04233 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD74P04233 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD74P04233 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD74P04233 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.51■□□□□ 0.39
CD74P04233 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CD74P04233 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD74P04233 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.51■□□□□ 0.39
CD74P04233 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.51■□□□□ 0.39
CD74P04233 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.51■□□□□ 0.39
CD74P04233 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD74P04233 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD74P04233 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD74P04233 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CD74P04233 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD74P04233 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD74P04233 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CD74P04233 BX323043.1-201ENST00000641006 1765 ntBASIC17.51■□□□□ 0.39
CD74P04233 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.5■□□□□ 0.39
CD74P04233 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.5■□□□□ 0.39
CD74P04233 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.5■□□□□ 0.39
CD74P04233 MIR3181-201ENST00000578512 73 ntBASIC17.5■□□□□ 0.39
CD74P04233 MIR4787-201ENST00000607364 84 ntBASIC17.5■□□□□ 0.39
CD74P04233 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 AC012354.3-201ENST00000623734 483 ntBASIC17.5■□□□□ 0.39
CD74P04233 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.5■□□□□ 0.39
CD74P04233 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CD74P04233 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD74P04233 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.5■□□□□ 0.39
CD74P04233 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD74P04233 AL020996.1-203ENST00000536896 2307 ntBASIC17.49■□□□□ 0.39
CD74P04233 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD74P04233 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CD74P04233 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD74P04233 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD74P04233 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD74P04233 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD74P04233 AL033527.3-201ENST00000566366 1196 ntBASIC17.49■□□□□ 0.39
CD74P04233 AC087289.5-201ENST00000586076 3175 ntBASIC17.49■□□□□ 0.39
CD74P04233 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD74P04233 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.49■□□□□ 0.39
CD74P04233 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD74P04233 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CD74P04233 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CD74P04233 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 FP700111.2-201ENST00000619190 1892 ntBASIC17.48■□□□□ 0.39
CD74P04233 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 AC010525.1-201ENST00000585559 441 ntBASIC17.48■□□□□ 0.39
CD74P04233 AC099791.2-201ENST00000605725 427 ntBASIC17.48■□□□□ 0.39
CD74P04233 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CD74P04233 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.48■□□□□ 0.39
CD74P04233 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.48■□□□□ 0.39
CD74P04233 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.48■□□□□ 0.39
CD74P04233 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CD74P04233 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CD74P04233 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD74P04233 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CD74P04233 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.48■□□□□ 0.39
CD74P04233 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 AC018445.3-201ENST00000624177 1945 ntBASIC17.47■□□□□ 0.39
CD74P04233 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.47■□□□□ 0.39
CD74P04233 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CD74P04233 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CD74P04233 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms