Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 TSPY26P-201ENST00000476365 1326 ntBASIC16.28■□□□□ 0.2
TOMM40O96008 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.28■□□□□ 0.2
TOMM40O96008 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.28■□□□□ 0.2
TOMM40O96008 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TOMM40O96008 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TOMM40O96008 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TOMM40O96008 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.27■□□□□ 0.2
TOMM40O96008 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TOMM40O96008 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOMM40O96008 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOMM40O96008 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOMM40O96008 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.27■□□□□ 0.2
TOMM40O96008 AC096631.2-201ENST00000436136 790 ntBASIC16.27■□□□□ 0.2
TOMM40O96008 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.27■□□□□ 0.2
TOMM40O96008 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.27■□□□□ 0.2
TOMM40O96008 PBX2P1-201ENST00000493219 1291 ntBASIC16.27■□□□□ 0.2
TOMM40O96008 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.27■□□□□ 0.2
TOMM40O96008 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.27■□□□□ 0.2
TOMM40O96008 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TOMM40O96008 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TOMM40O96008 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TOMM40O96008 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TOMM40O96008 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TOMM40O96008 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TOMM40O96008 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TOMM40O96008 AC005224.4-201ENST00000583262 1652 ntBASIC16.27■□□□□ 0.19
TOMM40O96008 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TOMM40O96008 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.27■□□□□ 0.19
TOMM40O96008 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TOMM40O96008 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TOMM40O96008 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.26■□□□□ 0.19
TOMM40O96008 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.26■□□□□ 0.19
TOMM40O96008 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.26■□□□□ 0.19
TOMM40O96008 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.26■□□□□ 0.19
TOMM40O96008 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.26■□□□□ 0.19
TOMM40O96008 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.26■□□□□ 0.19
TOMM40O96008 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.26■□□□□ 0.19
TOMM40O96008 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TOMM40O96008 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TOMM40O96008 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TOMM40O96008 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TOMM40O96008 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.25■□□□□ 0.19
TOMM40O96008 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TOMM40O96008 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.25■□□□□ 0.19
TOMM40O96008 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.25■□□□□ 0.19
TOMM40O96008 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TOMM40O96008 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.25■□□□□ 0.19
TOMM40O96008 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.25■□□□□ 0.19
TOMM40O96008 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
TOMM40O96008 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TOMM40O96008 AC106739.1-201ENST00000617035 715 ntBASIC16.25■□□□□ 0.19
TOMM40O96008 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TOMM40O96008 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TOMM40O96008 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TOMM40O96008 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TOMM40O96008 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TOMM40O96008 BX005040.4-201ENST00000637145 1518 ntBASIC16.24■□□□□ 0.19
TOMM40O96008 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TOMM40O96008 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOMM40O96008 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOMM40O96008 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOMM40O96008 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOMM40O96008 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOMM40O96008 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.24■□□□□ 0.19
TOMM40O96008 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms