Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AL137784.2-201ENST00000607332 1000 ntBASIC21.87■■□□□ 1.09
TRUB2O95900 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.87■■□□□ 1.09
TRUB2O95900 MYCNOS-205ENST00000641950 531 ntBASIC21.87■■□□□ 1.09
TRUB2O95900 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TRUB2O95900 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TRUB2O95900 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.86■■□□□ 1.09
TRUB2O95900 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TRUB2O95900 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.86■■□□□ 1.09
TRUB2O95900 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TRUB2O95900 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.86■■□□□ 1.09
TRUB2O95900 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.86■■□□□ 1.09
TRUB2O95900 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.86■■□□□ 1.09
TRUB2O95900 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.86■■□□□ 1.09
TRUB2O95900 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.86■■□□□ 1.09
TRUB2O95900 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 KRT16P2-201ENST00000414673 1423 ntBASIC21.86■■□□□ 1.09
TRUB2O95900 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.86■■□□□ 1.09
TRUB2O95900 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRUB2O95900 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
TRUB2O95900 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TRUB2O95900 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TRUB2O95900 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TRUB2O95900 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.85■■□□□ 1.09
TRUB2O95900 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.85■■□□□ 1.09
TRUB2O95900 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
TRUB2O95900 SLC7A5P1-201ENST00000568957 537 ntBASIC21.85■■□□□ 1.09
TRUB2O95900 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.85■■□□□ 1.09
TRUB2O95900 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TRUB2O95900 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TRUB2O95900 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRUB2O95900 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TRUB2O95900 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 AC004911.1-201ENST00000416316 871 ntBASIC21.84■■□□□ 1.09
TRUB2O95900 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.84■■□□□ 1.09
TRUB2O95900 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TRUB2O95900 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.84■■□□□ 1.09
TRUB2O95900 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.84■■□□□ 1.09
TRUB2O95900 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRUB2O95900 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
TRUB2O95900 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRUB2O95900 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.83■■□□□ 1.09
TRUB2O95900 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRUB2O95900 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRUB2O95900 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRUB2O95900 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRUB2O95900 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRUB2O95900 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRUB2O95900 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.83■■□□□ 1.09
TRUB2O95900 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.83■■□□□ 1.09
TRUB2O95900 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRUB2O95900 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.83■■□□□ 1.09
TRUB2O95900 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.83■■□□□ 1.09
TRUB2O95900 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRUB2O95900 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.83■■□□□ 1.09
TRUB2O95900 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRUB2O95900 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.83■■□□□ 1.08
TRUB2O95900 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.83■■□□□ 1.08
TRUB2O95900 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.83■■□□□ 1.08
TRUB2O95900 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.82■■□□□ 1.08
TRUB2O95900 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRUB2O95900 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRUB2O95900 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRUB2O95900 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.82■■□□□ 1.08
TRUB2O95900 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRUB2O95900 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRUB2O95900 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.82■■□□□ 1.08
TRUB2O95900 MFSD11-216ENST00000590393 1141 ntBASIC21.82■■□□□ 1.08
TRUB2O95900 BID-214ENST00000617586 542 ntTSL 5 BASIC21.82■■□□□ 1.08
TRUB2O95900 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRUB2O95900 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.82■■□□□ 1.08
TRUB2O95900 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TRUB2O95900 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.82■■□□□ 1.08
TRUB2O95900 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TRUB2O95900 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
TRUB2O95900 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRUB2O95900 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms