Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC112229.1-201ENST00000639295 961 ntBASIC18.5■□□□□ 0.55
CNOT4O95628 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.5■□□□□ 0.55
CNOT4O95628 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT4O95628 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT4O95628 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT4O95628 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT4O95628 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNOT4O95628 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT4O95628 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CNOT4O95628 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 AC007322.4-201ENST00000509611 723 ntBASIC18.49■□□□□ 0.55
CNOT4O95628 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT4O95628 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.49■□□□□ 0.55
CNOT4O95628 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.49■□□□□ 0.55
CNOT4O95628 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.49■□□□□ 0.55
CNOT4O95628 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CNOT4O95628 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.49■□□□□ 0.55
CNOT4O95628 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNOT4O95628 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CNOT4O95628 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT4O95628 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT4O95628 TERF1P5-201ENST00000477545 1207 ntBASIC18.48■□□□□ 0.55
CNOT4O95628 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CNOT4O95628 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNOT4O95628 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.48■□□□□ 0.55
CNOT4O95628 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
CNOT4O95628 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT4O95628 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.47■□□□□ 0.55
CNOT4O95628 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT4O95628 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT4O95628 AC061975.6-201ENST00000579045 1553 ntBASIC18.47■□□□□ 0.55
CNOT4O95628 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT4O95628 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CNOT4O95628 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT4O95628 CROCCP5-201ENST00000436658 830 ntBASIC18.47■□□□□ 0.55
CNOT4O95628 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CNOT4O95628 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT4O95628 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CNOT4O95628 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT4O95628 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.47■□□□□ 0.55
CNOT4O95628 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT4O95628 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT4O95628 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT4O95628 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT4O95628 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.46■□□□□ 0.55
CNOT4O95628 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CNOT4O95628 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT4O95628 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CNOT4O95628 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT4O95628 AC007322.1-201ENST00000426983 750 ntBASIC18.46■□□□□ 0.55
CNOT4O95628 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.46■□□□□ 0.55
CNOT4O95628 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT4O95628 AL162412.1-201ENST00000567129 965 ntBASIC18.46■□□□□ 0.55
CNOT4O95628 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CNOT4O95628 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CNOT4O95628 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CNOT4O95628 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT4O95628 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT4O95628 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT4O95628 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.45■□□□□ 0.54
CNOT4O95628 NCF1B-203ENST00000435988 1254 ntBASIC18.45■□□□□ 0.54
CNOT4O95628 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT4O95628 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT4O95628 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT4O95628 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.45■□□□□ 0.54
CNOT4O95628 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT4O95628 TMEM191A-211ENST00000637163 1067 ntBASIC18.45■□□□□ 0.54
CNOT4O95628 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT4O95628 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT4O95628 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT4O95628 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT4O95628 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CNOT4O95628 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT4O95628 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
CNOT4O95628 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
CNOT4O95628 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT4O95628 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT4O95628 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNOT4O95628 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CNOT4O95628 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.44■□□□□ 0.54
CNOT4O95628 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT4O95628 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms