Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC091874.3-201ENST00000512672 1195 ntBASIC20.67■□□□□ 0.9
PCDHGA12O60330 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHGA12O60330 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA12O60330 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHGA12O60330 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA12O60330 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA12O60330 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA12O60330 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA12O60330 DUSP5P2-201ENST00000426873 1033 ntBASIC20.66■□□□□ 0.9
PCDHGA12O60330 RPS2P52-201ENST00000469610 820 ntBASIC20.66■□□□□ 0.9
PCDHGA12O60330 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHGA12O60330 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA12O60330 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHGA12O60330 AC243732.1-201ENST00000612648 864 ntBASIC20.66■□□□□ 0.9
PCDHGA12O60330 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHGA12O60330 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA12O60330 AC010980.2-201ENST00000587099 1412 ntBASIC20.66■□□□□ 0.9
PCDHGA12O60330 RBM17P2-201ENST00000616397 1405 ntBASIC20.66■□□□□ 0.9
PCDHGA12O60330 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA12O60330 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PCDHGA12O60330 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA12O60330 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA12O60330 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHGA12O60330 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGA12O60330 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGA12O60330 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA12O60330 GCSHP5-201ENST00000443090 522 ntBASIC20.65■□□□□ 0.9
PCDHGA12O60330 AC098590.1-201ENST00000468126 897 ntBASIC20.65■□□□□ 0.9
PCDHGA12O60330 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA12O60330 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHGA12O60330 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA12O60330 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA12O60330 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA12O60330 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA12O60330 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGA12O60330 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHGA12O60330 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA12O60330 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA12O60330 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHGA12O60330 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA12O60330 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGA12O60330 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA12O60330 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGA12O60330 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGA12O60330 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA12O60330 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA12O60330 AL024507.2-201ENST00000606070 2574 ntBASIC20.64■□□□□ 0.89
PCDHGA12O60330 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA12O60330 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA12O60330 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHGA12O60330 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA12O60330 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA12O60330 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA12O60330 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA12O60330 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA12O60330 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA12O60330 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA12O60330 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA12O60330 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA12O60330 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA12O60330 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA12O60330 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGA12O60330 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDHGA12O60330 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
PCDHGA12O60330 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGA12O60330 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA12O60330 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGA12O60330 AC242852.2-201ENST00000615738 1807 ntBASIC20.62■□□□□ 0.89
PCDHGA12O60330 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA12O60330 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA12O60330 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA12O60330 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA12O60330 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA12O60330 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA12O60330 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHGA12O60330 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA12O60330 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms