Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
FOXN1O15353 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25■■□□□ 1.59
FOXN1O15353 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25■■□□□ 1.59
FOXN1O15353 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25■■□□□ 1.59
FOXN1O15353 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC25■■□□□ 1.59
FOXN1O15353 RN7SL850P-201ENST00000579959 291 ntBASIC25■■□□□ 1.59
FOXN1O15353 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
FOXN1O15353 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
FOXN1O15353 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25■■□□□ 1.59
FOXN1O15353 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25■■□□□ 1.59
FOXN1O15353 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
FOXN1O15353 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FOXN1O15353 KRT17P2-201ENST00000300992 1314 ntBASIC24.99■■□□□ 1.59
FOXN1O15353 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
FOXN1O15353 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
FOXN1O15353 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
FOXN1O15353 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
FOXN1O15353 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.99■■□□□ 1.59
FOXN1O15353 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
FOXN1O15353 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
FOXN1O15353 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
FOXN1O15353 AC138907.5-202ENST00000569484 235 ntBASIC24.99■■□□□ 1.59
FOXN1O15353 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.99■■□□□ 1.59
FOXN1O15353 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.99■■□□□ 1.59
FOXN1O15353 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
FOXN1O15353 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.98■■□□□ 1.59
FOXN1O15353 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.98■■□□□ 1.59
FOXN1O15353 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.98■■□□□ 1.59
FOXN1O15353 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
FOXN1O15353 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
FOXN1O15353 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
FOXN1O15353 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.98■■□□□ 1.59
FOXN1O15353 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC24.98■■□□□ 1.59
FOXN1O15353 PRKY-204ENST00000533551 1019 ntBASIC24.98■■□□□ 1.59
FOXN1O15353 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.98■■□□□ 1.59
FOXN1O15353 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
FOXN1O15353 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
FOXN1O15353 LINC00526-201ENST00000581067 1875 ntBASIC24.98■■□□□ 1.59
FOXN1O15353 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
FOXN1O15353 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
FOXN1O15353 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
FOXN1O15353 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.97■■□□□ 1.59
FOXN1O15353 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
FOXN1O15353 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 RN7SL471P-201ENST00000580476 299 ntBASIC24.97■■□□□ 1.59
FOXN1O15353 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
FOXN1O15353 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
FOXN1O15353 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FOXN1O15353 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
FOXN1O15353 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
FOXN1O15353 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.96■■□□□ 1.59
FOXN1O15353 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
FOXN1O15353 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
FOXN1O15353 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
FOXN1O15353 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
FOXN1O15353 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
FOXN1O15353 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.96■■□□□ 1.59
FOXN1O15353 TSPY15P-201ENST00000457163 923 ntBASIC24.96■■□□□ 1.59
FOXN1O15353 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.96■■□□□ 1.59
FOXN1O15353 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.96■■□□□ 1.59
FOXN1O15353 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
FOXN1O15353 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
FOXN1O15353 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
FOXN1O15353 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
FOXN1O15353 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
FOXN1O15353 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
FOXN1O15353 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
FOXN1O15353 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.95■■□□□ 1.59
FOXN1O15353 ECEL1P1-201ENST00000373592 1742 ntBASIC24.95■■□□□ 1.59
FOXN1O15353 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
FOXN1O15353 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
FOXN1O15353 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
FOXN1O15353 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
FOXN1O15353 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
FOXN1O15353 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
FOXN1O15353 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
FOXN1O15353 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
FOXN1O15353 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
FOXN1O15353 AC010980.2-201ENST00000587099 1412 ntBASIC24.95■■□□□ 1.58
FOXN1O15353 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.94■■□□□ 1.58
FOXN1O15353 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.94■■□□□ 1.58
FOXN1O15353 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
FOXN1O15353 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.94■■□□□ 1.58
FOXN1O15353 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
FOXN1O15353 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.94■■□□□ 1.58
FOXN1O15353 CD177P1-201ENST00000606252 935 ntBASIC24.94■■□□□ 1.58
FOXN1O15353 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.94■■□□□ 1.58
FOXN1O15353 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms