Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.81■□□□□ 0.92
COPEO14579 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 AC027702.1-201ENST00000563810 1770 ntBASIC20.81■□□□□ 0.92
COPEO14579 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.81■□□□□ 0.92
COPEO14579 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.81■□□□□ 0.92
COPEO14579 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
COPEO14579 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.8■□□□□ 0.92
COPEO14579 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COPEO14579 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPEO14579 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
COPEO14579 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
COPEO14579 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPEO14579 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COPEO14579 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
COPEO14579 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COPEO14579 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COPEO14579 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPEO14579 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.8■□□□□ 0.92
COPEO14579 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COPEO14579 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COPEO14579 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.8■□□□□ 0.92
COPEO14579 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
COPEO14579 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
COPEO14579 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPEO14579 PCDHAC2-203ENST00000615316 3011 ntBASIC20.79■□□□□ 0.92
COPEO14579 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPEO14579 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COPEO14579 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.79■□□□□ 0.92
COPEO14579 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPEO14579 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COPEO14579 GUSBP5-201ENST00000418136 578 ntBASIC20.79■□□□□ 0.92
COPEO14579 AL035685.1-201ENST00000636663 812 ntBASIC20.79■□□□□ 0.92
COPEO14579 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.79■□□□□ 0.92
COPEO14579 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.79■□□□□ 0.92
COPEO14579 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.79■□□□□ 0.92
COPEO14579 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
COPEO14579 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.78■□□□□ 0.92
COPEO14579 AC007225.1-201ENST00000566331 1836 ntBASIC20.78■□□□□ 0.92
COPEO14579 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COPEO14579 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.78■□□□□ 0.92
COPEO14579 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.78■□□□□ 0.92
COPEO14579 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.78■□□□□ 0.92
COPEO14579 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.78■□□□□ 0.92
COPEO14579 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.78■□□□□ 0.92
COPEO14579 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.78■□□□□ 0.92
COPEO14579 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.78■□□□□ 0.92
COPEO14579 SMUG1P1-201ENST00000590640 811 ntBASIC20.78■□□□□ 0.92
COPEO14579 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COPEO14579 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.78■□□□□ 0.92
COPEO14579 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPEO14579 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.77■□□□□ 0.92
COPEO14579 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.77■□□□□ 0.92
COPEO14579 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
COPEO14579 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPEO14579 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.77■□□□□ 0.92
COPEO14579 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.77■□□□□ 0.92
COPEO14579 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPEO14579 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COPEO14579 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COPEO14579 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
COPEO14579 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COPEO14579 AC020907.5-201ENST00000624372 1936 ntBASIC20.76■□□□□ 0.91
COPEO14579 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
COPEO14579 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.76■□□□□ 0.91
COPEO14579 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
COPEO14579 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.76■□□□□ 0.91
COPEO14579 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.76■□□□□ 0.91
COPEO14579 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.76■□□□□ 0.91
COPEO14579 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
COPEO14579 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.76■□□□□ 0.91
COPEO14579 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
COPEO14579 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
COPEO14579 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COPEO14579 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COPEO14579 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COPEO14579 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.75■□□□□ 0.91
COPEO14579 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COPEO14579 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms