Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.89■□□□□ 0.77
RTCAO00442 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
RTCAO00442 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RTCAO00442 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
RTCAO00442 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.88■□□□□ 0.77
RTCAO00442 MIR935-201ENST00000401179 91 ntBASIC19.88■□□□□ 0.77
RTCAO00442 POU5F1P4-201ENST00000413175 1085 ntBASIC19.88■□□□□ 0.77
RTCAO00442 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.88■□□□□ 0.77
RTCAO00442 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RTCAO00442 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTCAO00442 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTCAO00442 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.87■□□□□ 0.77
RTCAO00442 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTCAO00442 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
RTCAO00442 KRT18P5-201ENST00000436075 1291 ntBASIC19.87■□□□□ 0.77
RTCAO00442 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTCAO00442 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTCAO00442 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTCAO00442 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.87■□□□□ 0.77
RTCAO00442 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.87■□□□□ 0.77
RTCAO00442 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTCAO00442 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.87■□□□□ 0.77
RTCAO00442 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTCAO00442 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.86■□□□□ 0.77
RTCAO00442 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RTCAO00442 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RTCAO00442 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RTCAO00442 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 KRT19P1-201ENST00000405746 1186 ntBASIC19.86■□□□□ 0.77
RTCAO00442 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.86■□□□□ 0.77
RTCAO00442 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.86■□□□□ 0.77
RTCAO00442 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RTCAO00442 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.86■□□□□ 0.77
RTCAO00442 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RTCAO00442 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.86■□□□□ 0.77
RTCAO00442 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTCAO00442 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RTCAO00442 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTCAO00442 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTCAO00442 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTCAO00442 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTCAO00442 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTCAO00442 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTCAO00442 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTCAO00442 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.85■□□□□ 0.77
RTCAO00442 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTCAO00442 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTCAO00442 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTCAO00442 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTCAO00442 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.84■□□□□ 0.77
RTCAO00442 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.84■□□□□ 0.77
RTCAO00442 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.84■□□□□ 0.77
RTCAO00442 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.84■□□□□ 0.77
RTCAO00442 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTCAO00442 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTCAO00442 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTCAO00442 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTCAO00442 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTCAO00442 AL162430.1-201ENST00000480705 870 ntBASIC19.83■□□□□ 0.77
RTCAO00442 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTCAO00442 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.83■□□□□ 0.77
RTCAO00442 MIR5787-201ENST00000611784 55 ntBASIC19.83■□□□□ 0.77
RTCAO00442 AC120498.10-201ENST00000621827 505 ntBASIC19.83■□□□□ 0.77
RTCAO00442 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTCAO00442 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.83■□□□□ 0.76
RTCAO00442 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.83■□□□□ 0.76
RTCAO00442 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms