Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 AC008175.2-201ENST00000612840 297 ntBASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TMX2-CTNND1H3BSU7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 AC069236.1-201ENST00000604339 616 ntBASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMX2-CTNND1H3BSU7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMX2-CTNND1H3BSU7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMX2-CTNND1H3BSU7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMX2-CTNND1H3BSU7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TMX2-CTNND1H3BSU7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMX2-CTNND1H3BSU7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 POU5F1P4-201ENST00000413175 1085 ntBASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 AL512625.2-201ENST00000417533 625 ntBASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.38■□□□□ 0.85
TMX2-CTNND1H3BSU7 AP006587.3-201ENST00000525742 1516 ntBASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 AC068338.2-201ENST00000563278 1430 ntBASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMX2-CTNND1H3BSU7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms