Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.76■□□□□ 0.91
H3BM21 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.76■□□□□ 0.91
H3BM21 AL138781.1-201ENST00000566567 1274 ntBASIC20.76■□□□□ 0.91
H3BM21 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.76■□□□□ 0.91
H3BM21 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 AC069236.1-201ENST00000604339 616 ntBASIC20.76■□□□□ 0.91
H3BM21 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
H3BM21 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3BM21 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
H3BM21 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 ABHD17AP1-201ENST00000358206 933 ntBASIC20.75■□□□□ 0.91
H3BM21 AC069152.1-201ENST00000438030 544 ntBASIC20.75■□□□□ 0.91
H3BM21 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.75■□□□□ 0.91
H3BM21 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
H3BM21 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.75■□□□□ 0.91
H3BM21 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.75■□□□□ 0.91
H3BM21 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 AC068338.2-201ENST00000563278 1430 ntBASIC20.75■□□□□ 0.91
H3BM21 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.75■□□□□ 0.91
H3BM21 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H3BM21 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3BM21 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H3BM21 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H3BM21 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
H3BM21 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.74■□□□□ 0.91
H3BM21 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
H3BM21 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
H3BM21 KRT16P2-201ENST00000414673 1423 ntBASIC20.74■□□□□ 0.91
H3BM21 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.74■□□□□ 0.91
H3BM21 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H3BM21 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
H3BM21 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.74■□□□□ 0.91
H3BM21 KRT18P6-201ENST00000555540 1265 ntBASIC20.74■□□□□ 0.91
H3BM21 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H3BM21 OR10C1-204ENST00000622521 1039 ntBASIC20.74■□□□□ 0.91
H3BM21 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.74■□□□□ 0.91
H3BM21 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
H3BM21 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
H3BM21 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.74■□□□□ 0.91
H3BM21 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3BM21 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H3BM21 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3BM21 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
H3BM21 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3BM21 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.73■□□□□ 0.91
H3BM21 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.73■□□□□ 0.91
H3BM21 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H3BM21 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.73■□□□□ 0.91
H3BM21 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
H3BM21 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.73■□□□□ 0.91
H3BM21 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.73■□□□□ 0.91
H3BM21 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
H3BM21 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
H3BM21 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.73■□□□□ 0.91
H3BM21 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3BM21 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3BM21 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3BM21 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3BM21 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3BM21 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
H3BM21 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.72■□□□□ 0.91
H3BM21 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
H3BM21 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.72■□□□□ 0.91
H3BM21 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3BM21 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.72■□□□□ 0.91
H3BM21 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H3BM21 AC073210.2-201ENST00000430369 194 ntBASIC20.72■□□□□ 0.91
H3BM21 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.72■□□□□ 0.91
H3BM21 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.72■□□□□ 0.91
H3BM21 MIR4758-201ENST00000577688 71 ntBASIC20.72■□□□□ 0.91
H3BM21 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.72■□□□□ 0.91
H3BM21 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3BM21 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
H3BM21 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3BM21 MKRN4P-201ENST00000444706 1521 ntBASIC20.72■□□□□ 0.91
H3BM21 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3BM21 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H3BM21 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3BM21 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.71■□□□□ 0.91
H3BM21 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
H3BM21 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H3BM21 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms