Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CGB1A6NKQ9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CGB1A6NKQ9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CGB1A6NKQ9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CGB1A6NKQ9 PLK5-205ENST00000642079 1969 ntBASIC16.64■□□□□ 0.25
CGB1A6NKQ9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 EEF1DP3-203ENST00000566025 782 ntBASIC16.63■□□□□ 0.25
CGB1A6NKQ9 AC142381.2-201ENST00000566120 298 ntBASIC16.63■□□□□ 0.25
CGB1A6NKQ9 AL354811.1-201ENST00000610286 706 ntBASIC16.63■□□□□ 0.25
CGB1A6NKQ9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGB1A6NKQ9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.62■□□□□ 0.25
CGB1A6NKQ9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 AC005837.3-201ENST00000612163 286 ntBASIC16.62■□□□□ 0.25
CGB1A6NKQ9 MIR6084-201ENST00000622012 110 ntBASIC16.62■□□□□ 0.25
CGB1A6NKQ9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CGB1A6NKQ9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 AC053503.5-201ENST00000601508 636 ntBASIC16.61■□□□□ 0.25
CGB1A6NKQ9 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGB1A6NKQ9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms