Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 MIR663A-201ENST00000385250 93 ntBASIC17.11■□□□□ 0.33
A0A1W2PRF3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 DUX4L16-201ENST00000555130 1264 ntBASIC17.11■□□□□ 0.33
A0A1W2PRF3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.11■□□□□ 0.33
A0A1W2PRF3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
A0A1W2PRF3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 KRT18P20-201ENST00000548986 1279 ntBASIC17.1■□□□□ 0.33
A0A1W2PRF3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 AC010536.3-201ENST00000620306 533 ntBASIC17.1■□□□□ 0.33
A0A1W2PRF3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.1■□□□□ 0.33
A0A1W2PRF3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
A0A1W2PRF3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
A0A1W2PRF3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 POU5F1P4-201ENST00000413175 1085 ntBASIC17.09■□□□□ 0.33
A0A1W2PRF3 AC007322.1-201ENST00000426983 750 ntBASIC17.09■□□□□ 0.33
A0A1W2PRF3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.09■□□□□ 0.33
A0A1W2PRF3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
A0A1W2PRF3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
A0A1W2PRF3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
A0A1W2PRF3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
A0A1W2PRF3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
A0A1W2PRF3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.08■□□□□ 0.33
A0A1W2PRF3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
A0A1W2PRF3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
A0A1W2PRF3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.08■□□□□ 0.32
A0A1W2PRF3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
A0A1W2PRF3 CROCCP5-201ENST00000436658 830 ntBASIC17.08■□□□□ 0.32
A0A1W2PRF3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.08■□□□□ 0.32
A0A1W2PRF3 RAP2CP1-201ENST00000605103 478 ntBASIC17.08■□□□□ 0.32
A0A1W2PRF3 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.08■□□□□ 0.32
A0A1W2PRF3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
A0A1W2PRF3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
A0A1W2PRF3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
A0A1W2PRF3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
A0A1W2PRF3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
A0A1W2PRF3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
A0A1W2PRF3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
A0A1W2PRF3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.07■□□□□ 0.32
A0A1W2PRF3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
A0A1W2PRF3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
A0A1W2PRF3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
A0A1W2PRF3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
A0A1W2PRF3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.07■□□□□ 0.32
A0A1W2PRF3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
A0A1W2PRF3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
A0A1W2PRF3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
A0A1W2PRF3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
A0A1W2PRF3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.07■□□□□ 0.32
A0A1W2PRF3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms