Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 AC245052.3-201ENST00000450182 901 ntBASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV41A0A0B4J266 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 AC004911.1-201ENST00000416316 871 ntBASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 AC092437.1-201ENST00000624794 1048 ntBASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV41A0A0B4J266 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 AC011767.1-201ENST00000617410 1153 ntBASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV41A0A0B4J266 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV41A0A0B4J266 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 MFSD11-216ENST00000590393 1141 ntBASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 AC010536.3-201ENST00000620306 533 ntBASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV41A0A0B4J266 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms