Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNA5SP207-201ENST00000390874 107 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AL592043.1-201ENST00000412652 526 ntTSL 3 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 OR8C1P-201ENST00000427511 925 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 OR5G5P-202ENST00000440707 939 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AL049747.1-201ENST00000472240 852 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 NME9-208ENST00000484930 825 ntTSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AC007160.1-201ENST00000488095 319 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 RN7SL625P-201ENST00000488637 291 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 OR7E94P-201ENST00000502331 374 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 BTNL8-207ENST00000511704 1260 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AC092535.2-201ENST00000513176 1204 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 SMUG1-222ENST00000514685 926 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 RNA5SP444-201ENST00000516844 106 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 RPL38-207ENST00000534490 429 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 FCF1-202ENST00000534938 794 ntTSL 3 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AL079352.1-201ENST00000547237 1042 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ARL1-210ENST00000551688 470 ntTSL 4 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AL163195.2-203ENST00000553604 573 ntTSL 4 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AC010333.2-201ENST00000564505 698 ntTSL 3 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 COX6CP1-201ENST00000564972 215 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AL031709.1-201ENST00000569831 435 ntTSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AC007595.1-201ENST00000576710 483 ntTSL 2 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AC002116.2-201ENST00000586962 643 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 SMCO4P1-201ENST00000592909 177 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AL359921.2-201ENST00000608547 543 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AC027345.1-201ENST00000611900 500 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ZRANB2-AS2-224ENST00000626344 400 ntTSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AL355480.3-201ENST00000630128 96 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AL035660.2-202ENST00000641233 242 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 C12orf40-201ENST00000324616 2776 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 LINC02099-201ENST00000517491 2791 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 PPM1K-210ENST00000608933 6484 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 RNF138-202ENST00000261593 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ADCY5-210ENST00000491190 3962 ntTSL 2 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ANKRD42-204ENST00000526731 3230 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AC079610.1-201ENST00000360083 1727 ntTSL 2 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 AP002358.2-201ENST00000532980 2148 ntBASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 CDH4-202ENST00000611855 3304 ntTSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 FAM106A-201ENST00000392176 2281 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 ANAPC16-201ENST00000299381 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
NPIPA3F8WFD2 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 ASB9-209ENST00000546332 1947 ntTSL 2 BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 TEC-201ENST00000381501 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 SFTPB-201ENST00000393822 3666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 TTYH2-202ENST00000441391 3661 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 AP000350.7-201ENST00000624923 8030 ntBASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 ICA1-209ENST00000422063 1539 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 CASC19-230ENST00000641421 1530 ntBASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 ALDH1A2-202ENST00000347587 3297 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 AC027045.3-201ENST00000635215 2884 ntTSL 5 BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 USP17L10-201ENST00000417945 1593 ntAPPRIS P2 BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 TREM1-207ENST00000591620 2048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 RFX2-201ENST00000303657 3993 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 SLA-202ENST00000395352 2102 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 PCAT29-201ENST00000558411 2121 ntTSL 2 BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 AL138889.1-202ENST00000451317 3630 ntTSL 2 BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 PHACTR3-201ENST00000355648 2247 ntTSL 2 BASIC9.46□□□□□ -0.89
NPIPA3F8WFD2 AL669983.1-201ENST00000306634 318 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 ZNF816-204ENST00000391786 562 ntTSL 4 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AP000692.1-201ENST00000397184 596 ntTSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 RNASE1-204ENST00000412779 896 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 POU6F2-AS2-201ENST00000420243 514 ntTSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AL450344.3-201ENST00000430770 378 ntTSL 3 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AK3P3-201ENST00000431883 664 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AL139260.1-201ENST00000433671 630 ntTSL 3 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AL357060.2-201ENST00000440578 1025 ntTSL 3 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 TRAF3IP2-AS1-207ENST00000456352 484 ntTSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 KCNAB1-AS2-201ENST00000473876 538 ntTSL 3 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 OR4A44P-201ENST00000524504 948 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AC079602.2-201ENST00000538389 283 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AP003721.4-201ENST00000544421 810 ntTSL 2 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AC009660.1-201ENST00000559052 748 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 LINC02127-202ENST00000568607 897 ntTSL 2 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AC008731.1-201ENST00000568895 579 ntTSL 3 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AC139099.1-204ENST00000575205 425 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 LSP1P1-201ENST00000599825 133 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AC091544.6-201ENST00000607766 446 ntTSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 MIR6081-201ENST00000613785 97 ntBASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 C1orf61-227ENST00000615748 768 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 DPP6-216ENST00000619756 1109 ntTSL 5 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 THAP5-203ENST00000415914 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 ZNF135-204ENST00000506786 3349 ntTSL 2 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 AC026250.1-201ENST00000500698 2311 ntTSL 2 BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 ALAS1-205ENST00000484952 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
NPIPA3F8WFD2 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 862.5 ms