Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 OR7E47P-201ENST00000546390 1422 ntBASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA6Q9Y5G7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 SLC7A5P1-201ENST00000568957 537 ntBASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PCDHGA6Q9Y5G7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PCDHGA6Q9Y5G7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA6Q9Y5G7 AC005229.4-201ENST00000610085 2198 ntBASIC20.08■□□□□ 0.8
PCDHGA6Q9Y5G7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA6Q9Y5G7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDHGA6Q9Y5G7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
PCDHGA6Q9Y5G7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA6Q9Y5G7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA6Q9Y5G7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 AC010536.3-201ENST00000620306 533 ntBASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA6Q9Y5G7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 CNN2P6-201ENST00000439038 900 ntBASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA6Q9Y5G7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 SLC29A4P1-201ENST00000398760 971 ntBASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 CD99P1-205ENST00000527459 561 ntBASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 EEF1DP3-203ENST00000566025 782 ntBASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 AC133552.2-202ENST00000575694 574 ntBASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA6Q9Y5G7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA6Q9Y5G7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms