Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 AC093787.1-201ENST00000450396 207 ntBASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 AC016405.3-201ENST00000607710 860 ntBASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA9Q9Y5G4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA9Q9Y5G4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA9Q9Y5G4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 PRORSD1P-201ENST00000295112 541 ntBASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 BX276092.2-201ENST00000417668 665 ntBASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 MYC-209ENST00000641252 345 ntBASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 AL137060.1-201ENST00000618151 2648 ntBASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA9Q9Y5G4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 AC097658.1-201ENST00000475555 843 ntBASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 KRT16P2-201ENST00000414673 1423 ntBASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA9Q9Y5G4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 RARRES2P4-201ENST00000514074 484 ntBASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA9Q9Y5G4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms