Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 AC010141.2-201ENST00000452426 721 ntBASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB6Q9Y5E3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 PLK5-205ENST00000642079 1969 ntBASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHB6Q9Y5E3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 AC097381.1-201ENST00000429019 1296 ntBASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 AC008175.2-201ENST00000612840 297 ntBASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB6Q9Y5E3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 POU5F1P4-201ENST00000413175 1085 ntBASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 SLC7A5P2-201ENST00000553010 536 ntBASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 AP001160.3-201ENST00000601484 763 ntBASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 AC087623.3-201ENST00000607047 1098 ntBASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB6Q9Y5E3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB6Q9Y5E3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 MIR6821-201ENST00000617625 74 ntBASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHB6Q9Y5E3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB6Q9Y5E3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms