Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 GCSHP5-201ENST00000443090 522 ntBASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 AC142381.4-202ENST00000563973 229 ntBASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDHB7Q9Y5E2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHB7Q9Y5E2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB7Q9Y5E2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHB7Q9Y5E2 AL158047.1-201ENST00000445918 881 ntBASIC22.58■■□□□ 1.21
PCDHB7Q9Y5E2 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHB7Q9Y5E2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.58■■□□□ 1.2
PCDHB7Q9Y5E2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHB7Q9Y5E2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 AP003097.1-201ENST00000530657 1135 ntBASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB7Q9Y5E2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 MCRIP2P1-201ENST00000394346 511 ntBASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 AL589743.5-201ENST00000616611 1050 ntBASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHB7Q9Y5E2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB7Q9Y5E2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 FAM99A-202ENST00000538190 1989 ntBASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB7Q9Y5E2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 AC068473.5-201ENST00000616428 2072 ntBASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 AC073648.6-201ENST00000641589 218 ntBASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB7Q9Y5E2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms