Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D4Q9Y2X8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D4Q9Y2X8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 MIR3621-201ENST00000580529 85 ntBASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 AC027702.1-201ENST00000563810 1770 ntBASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D4Q9Y2X8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 AL138724.1-201ENST00000606771 1088 ntBASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
UBE2D4Q9Y2X8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 AL391422.3-201ENST00000603791 2761 ntBASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 AC007952.6-201ENST00000573168 2673 ntBASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 AC003957.1-201ENST00000625108 2673 ntBASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 AC007225.1-201ENST00000566331 1836 ntBASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D4Q9Y2X8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 AC020907.5-201ENST00000624372 1936 ntBASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
UBE2D4Q9Y2X8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms