Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 AC027702.1-201ENST00000563810 1770 ntBASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.06■□□□□ 0.32
RCL1Q9Y2P8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 KRT8P33-201ENST00000508125 1423 ntBASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 AL451085.2-201ENST00000605085 799 ntBASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.05■□□□□ 0.32
RCL1Q9Y2P8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 AC133637.1-201ENST00000624115 1537 ntBASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RCL1Q9Y2P8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 YBX1P4-201ENST00000392794 808 ntBASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 AL031848.2-201ENST00000607670 837 ntBASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RCL1Q9Y2P8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 Z92544.1-202ENST00000571933 1220 ntBASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RCL1Q9Y2P8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCL1Q9Y2P8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCL1Q9Y2P8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCL1Q9Y2P8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms