Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LHX6Q9UPM6 DUSP8P3-201ENST00000399571 1760 ntBASIC19.75■□□□□ 0.75
LHX6Q9UPM6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 TPM4P1-201ENST00000436100 807 ntBASIC19.75■□□□□ 0.75
LHX6Q9UPM6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 AC233263.1-201ENST00000578059 224 ntBASIC19.75■□□□□ 0.75
LHX6Q9UPM6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LHX6Q9UPM6 ABCB10P4-201ENST00000566803 2184 ntBASIC19.74■□□□□ 0.75
LHX6Q9UPM6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 AP001412.1-201ENST00000608405 714 ntBASIC19.74■□□□□ 0.75
LHX6Q9UPM6 AC244517.3-201ENST00000616254 1235 ntBASIC19.74■□□□□ 0.75
LHX6Q9UPM6 HLA-B-256ENST00000639848 1089 ntBASIC19.74■□□□□ 0.75
LHX6Q9UPM6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.74■□□□□ 0.75
LHX6Q9UPM6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 AL049637.2-201ENST00000641778 930 ntBASIC19.73■□□□□ 0.75
LHX6Q9UPM6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.73■□□□□ 0.75
LHX6Q9UPM6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 AC055733.4-201ENST00000638462 1354 ntBASIC19.72■□□□□ 0.75
LHX6Q9UPM6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LHX6Q9UPM6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.71■□□□□ 0.75
LHX6Q9UPM6 AC069544.1-201ENST00000609399 999 ntBASIC19.71■□□□□ 0.75
LHX6Q9UPM6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms