Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 AC097658.1-201ENST00000475555 843 ntBASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 AC091799.1-201ENST00000422823 811 ntBASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRIT1Q9P2V4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRIT1Q9P2V4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 CDV3P1-201ENST00000471403 739 ntBASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRIT1Q9P2V4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 AC091874.3-201ENST00000512672 1195 ntBASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 AC083880.1-201ENST00000608266 535 ntBASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 MYC-209ENST00000641252 345 ntBASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRIT1Q9P2V4 LSM12P1-201ENST00000411836 588 ntBASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 DUSP5P2-201ENST00000426873 1033 ntBASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 POU5F1P3-201ENST00000428824 1078 ntBASIC20.2■□□□□ 0.82
LRIT1Q9P2V4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms