Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TREX1Q9NSU2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 AC104187.1-201ENST00000607510 612 ntBASIC20.86■□□□□ 0.93
TREX1Q9NSU2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 AC121338.2-201ENST00000622535 1744 ntBASIC20.86■□□□□ 0.93
TREX1Q9NSU2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.86■□□□□ 0.93
TREX1Q9NSU2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TREX1Q9NSU2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 KRT18P14-201ENST00000534205 1250 ntBASIC20.85■□□□□ 0.93
TREX1Q9NSU2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TREX1Q9NSU2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 KRT16P2-201ENST00000414673 1423 ntBASIC20.84■□□□□ 0.93
TREX1Q9NSU2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TREX1Q9NSU2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 DUX4L2-201ENST00000561772 1275 ntBASIC20.83■□□□□ 0.93
TREX1Q9NSU2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TREX1Q9NSU2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms